Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g00058 ATGGGGAAGTTCTTGATTCTGTCACTACTCCTGATGATAATTTCTGGATGTGTACAAACTGGAGAATCCAACTCCAAGTCCATTTTCATCGACTGTGGCTCAACTTCAAATGAAACTGTTGATGGTCGGAAATGGATTGGCGACCTGAGTTCTGAAGGGAAAGGGAACTTTTCTGTGGGCAGTCTTGGTGCTAATATCAATGCCTCCACAGCCACTCTAAACGGCGATTCAGTCTTTGAGCCGCTGTATAAAACTGCTCGGCTTTTTACTGATTCCCTAAACTATACCTTCAAAGGCGTTTGGGGTAATCATTTTGTTCGGCTCCATTTCTGCCCCTTCCCTTTTGAAAACCTGAATGTGAACGAGTCCTCATTTTCTGTCTCAGCAAATGGTCTTAGACTGGTTTCGGAGTTGAATGTTCCCAATGAGATTGCATATAAGAATTTGGAATTTCAGCGGTCTGGGATCAATTCAAGTTGGTTCTCTTTGATTAAAGAGTTCATTATTGTTGTCAATTCAGAGGCATTTGTTCTTGAGTTCTCCCCGTCTGGTGGATCATTTGGGTTCATTAATGCTATTGAAATCGTCCCCCTGGTGGATGAGCTCTTTGCAGGTTCGATTAATAAGGTGGGTGGAAATGCTGTTAGCTTGAATGTGAGTGAAAGGGGATCTGAAACTATGTACAGATTGAATGTTGGAGGTCCGGAGATCAAGCCCGCTCAAGATTCAAATGGTTGGAGAATGTGGGAAGTGGACTCGAGTTATATGATTACAGCAGATGCTGGGTTTGAGATACATAACAGTTCTAATATAACCTATGCTTCCATGAATGACTCCATTGTAGCTCCACTCCCTGTGTACGAAACAGCCAGGACGATGTCCGAGACCGAAGTGCTGGAGAAAAGGTTCAACATGTCGTGGAAATTCGAAGTTCATCCCGGGTTCGAGTATTTGATTAGACTGCATTTCTGTGAGCTGTTGTATGAGAAGGCAAGACAGAGGGTTTTCAAGATTTACATAAACAACAGGACTGCATTTGAGAATTTTGATGTGTTTGATAGAGCAGGGGGAATAAACAAAGCATATCATGTGGATTTTCTTGAACCAATATCATCCAAAATCAACACCCTTTGGATTCAATTAGGCCCTGATGCAGCTGCAGGTGCTGCAGGAACAGATGCTCTCTTGAATGGGCTGGAAATCTTTAAGCTGAGTCAAAATGGGAATCTTGCGTACATTGACAGGTTTAATGCCTTAGAGGAATCAATGGGAAATTCGAAATCTCTAACTCTTTGGATAGGCGTTGGAGCAGGTTTAGCCTCTGTTGTTTTGCTTGCTGTTATTACCGTTCTCATCATCTATTTCTGCAGATTCCGGAGAGAGGATTTTACTAAGAAGAGCTGTTCTAGGTGGAGAGCAGGATCCAGCCGTGGGGCCACTGTCTCCAACACTTATGCCAGAGGATCCTTGGGGGGAGGCAGTGTATTTGGGTCCATGCCAACCATCAGAGTTGGTAAATGGTTTACATTAGCTGAAATTCTTGCAGCGACCGATAAATTTGATGAAGCTCTGCTGATTGGAGTTGGGGGTTTTGGTAAGGTCTACAGAGGGGAGATTGATGATGGTACTCTTGTGGCTATCAAGAGAGCCAACCCACAGTCACAGCAGGGACTTACCGAGTTCGAGACCGAAATCGAAATGCTTTCTAAACTTAGGCATCGGCATTTGGTCTCGATGATTGGGTTTTGCGATGAGCAGAAGGAAATGATCTTGGTTTATGAGTACATGGGGAATGGAACCTTAAGAAGCCATCTCTTTGGGAGTGATCTCCCACCTTTGACATGGAAGCAGCGATTGGAAGTGTGCATTGGAGCAGCCAGGGGACTCCATTACCTTCACACAGGAGCTGAGAGAGGAATAATCCACAGAGATGTGAAGACAACCAACATACTCTTGGATGAGAACTTTGTGGCAAAAATGTCTGACTTCGGTCTTTCAAAAACAGGGCCTGCTTTGGATCATACCCATGTTAGTACTGCAGTAAAGGGCAGCTTTGGGTACCTGGATCCGGAGTATTTTAGGCGGCAGCAGCTGAGTGAAAAATCTGATGTCTATTCTTTTGGTGTGGTATTGTTAGAAGTTGTTTGTGCTCGAGCTGTTATAAACCCAACCTTGCCTAAGGATCAGATAAATCTTGCGGAATGGGCAATGAAATGGCAACGCAAGAAGTTGCTGCACACCATCATCGATCCGCGTCTCAACGACAAATATTGCCCCGAGTCTCTGAAAACATTTGGCGAGATAGCAGAAAAATGCCTTGCTGATGAAGGGAAGATTCGTCCAACAATGGGGGAAGTTTTATGGCACCTAGAATATGCTTTGCAACTCCATGATGCTTGGATCCGCACCAATGAAGCAGAAAGTTCTTGCAGGGTAGAGTCGGAAGGAGCGCAGGGTGACGAACAGATCGGCGAGAGCTCCAACTTGAAAGCTTCAACCCCAACTGATCAGGCATGCTAG 2520 44.72 MGKFLILSLLLMIISGCVQTGESNSKSIFIDCGSTSNETVDGRKWIGDLSSEGKGNFSVGSLGANINASTATLNGDSVFEPLYKTARLFTDSLNYTFKGVWGNHFVRLHFCPFPFENLNVNESSFSVSANGLRLVSELNVPNEIAYKNLEFQRSGINSSWFSLIKEFIIVVNSEAFVLEFSPSGGSFGFINAIEIVPLVDELFAGSINKVGGNAVSLNVSERGSETMYRLNVGGPEIKPAQDSNGWRMWEVDSSYMITADAGFEIHNSSNITYASMNDSIVAPLPVYETARTMSETEVLEKRFNMSWKFEVHPGFEYLIRLHFCELLYEKARQRVFKIYINNRTAFENFDVFDRAGGINKAYHVDFLEPISSKINTLWIQLGPDAAAGAAGTDALLNGLEIFKLSQNGNLAYIDRFNALEESMGNSKSLTLWIGVGAGLASVVLLAVITVLIIYFCRFRREDFTKKSCSRWRAGSSRGATVSNTYARGSLGGGSVFGSMPTIRVGKWFTLAEILAATDKFDEALLIGVGGFGKVYRGEIDDGTLVAIKRANPQSQQGLTEFETEIEMLSKLRHRHLVSMIGFCDEQKEMILVYEYMGNGTLRSHLFGSDLPPLTWKQRLEVCIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPALDHTHVSTAVKGSFGYLDPEYFRRQQLSEKSDVYSFGVVLLEVVCARAVINPTLPKDQINLAEWAMKWQRKKLLHTIIDPRLNDKYCPESLKTFGEIAEKCLADEGKIRPTMGEVLWHLEYALQLHDAWIRTNEAESSCRVESEGAQGDEQIGESSNLKASTPTDQAC 839
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 341576 344095 - CmoCh07G000580.1 Cmo07g00058 385366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g00058 839 PANTHER OSJNBA0058K23.13 PROTEIN 18 819 - -
Cmo07g00058 839 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Cmo07g00058 839 SUPERFAMILY Protein kinase-like (PK-like) 497 792 IPR011009 -
Cmo07g00058 839 MobiDBLite consensus disorder prediction 820 839 - -
Cmo07g00058 839 ProSiteProfiles Protein kinase domain profile. 520 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo07g00058 839 Pfam Malectin-like domain 30 403 IPR024788 -
Cmo07g00058 839 Gene3D - 24 198 - -
Cmo07g00058 839 Gene3D - 222 406 - -
Cmo07g00058 839 MobiDBLite consensus disorder prediction 811 839 - -
Cmo07g00058 839 CDD STKc_IRAK 526 791 - -
Cmo07g00058 839 SMART serkin_6 520 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo07g00058 839 Pfam Protein tyrosine and serine/threonine kinase 526 787 IPR001245 GO:0004672|GO:0006468
Cmo07g00058 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Cmo07g00058 839 PANTHER OS07G0166700 PROTEIN 18 819 IPR045272 GO:0004714|GO:0006468
Cmo07g00058 839 Gene3D Phosphorylase Kinase; domain 1 499 595 - -
Cmo07g00058 839 ProSitePatterns Protein kinases ATP-binding region signature. 526 548 IPR017441 GO:0005524
Cmo07g00058 839 Gene3D Transferase(Phosphotransferase) domain 1 596 815 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g01453 Cmo07g00058 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g00058 Cmo-Chr7:341576 Cmo09g00879 Cmo-Chr9:4556558 0 dispersed
Cmo03g01453 Cmo-Chr3:10495984 Cmo07g00058 Cmo-Chr7:341576 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74444 PF12819 Malectin_like 3.00E-32 CL0202 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g00058 - - bhj:120073088 1481.08