Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g00115 ATGAATTCGCTTTTAGCTTTTCTGTCGCCGCTGCTTCCTTTTCTGGCCTCTCTCGTGTTTCTGGTCATCTTCCTCGAGCAGATCTCTTACTTGAAGAAGAAACGCTCTGTTCCTGGTCCTCCTCTCGTTCTCCCTTTTGTCGGCAACGCAATTCCTCTGGTTAGGAATCCTGCCCGTTTCTGGGAAATTCAGGCTTCTTTGGCTAAATCCTCCGGGCATGGCTTCTCAGTCAACTACATCGCCGGGAATTTCATCGTCTTCATTCGCGACACTGAGCTCTCCCACAAGATTTTCGCCAATGTGCATTCCGATGCTATGAATCTCGTAGGTCATCCCTTCGGGAAGAAGCTATTCGGCGAGGATAATCTGATTTACATGTTAGGGCAAAAGCACAAGGATCTCCGCCGTCGAATCGCTCCCAATTTCACGACTAAAGCGCTTTCCACTTACACCGCGCTTCAGCAGATCATCATTCTCAAGCACTTGAAAATTTGGGATCAGAAGTCGTCGGAATCCTCGCCGAAGCCGATTCCCTTGAGGTTTCTCGCTCGAGATCTTAATCTCGAAACCTCTCAGATGGTGTTCGTCGGGCCGTATTTAGGCGAGGAGATTCGCGAGAACTTCAGAACCGATTACAACCTCTTTAACGTCGGTTTGATGAAACTCCCGATCGATTTGCCCGGAACTGGTTTCAGAAATGCGAGACTCGCCGTCGACCGGCTGGTGGAGGTCCTCGCCGACTGTGCGAAGCAGAGCAAGGCGAAGATGAAGAGAGAAGAAGAGCCGTCGTGTTTGATTGACTTCTGGATGCAGGACACCGTGAAGGAACTCGAGGAAGCGGCGGCGGCTGGCCTGCCGGAGCCGGTTCACACCAGTAATTTCGAGCTCGGACTCTACCTCTTCGATTTCCTCTTCGCCGCTCAAGACGCTTCCACTTCGTCGCTTCTATGGGCCGTCAGTCTCCTGGATTCCCATCCCGATGTTGTAGCCAAAGTTCGCGACGAAGTCCAATCCATCTGGTCGCCGGAATCGGACTCACTGATATCATCGGAACAGCTTGCGGAAATGAAGTACACTCAAGCGGTGGCGCGTGAGGTGGTCCGGTACCGCGCTCCGGCAACAGTGGTTCCACACGTGGCGGCGGCTAATTTCCCGTTGACGGAATCATACATCATCCCAAAAGGGGCAATCGTGTTCCCATCAGCGTACGAGTCGTGTCAGCAGGGTTTTGTGGAACCGGAGCAGTTCGATCCGGAGCGGTTCTCGGAGGAAAGGCAAGAGGACCGAATTTTCAAAAGGAACTTTCTGGCCTTCGGGGCTGGGTCCCACCAGTGCGTAGGGCAACGGTACGCGCTGAACCATCTCGTGCTCTTCATCGCCATGTTTTGTACGTTGCTTGATTTCAAGCGGCACAGATCCGACGGCTGTGATGAAATCGCCTTCAATCCCACCATCTGTCCCAAAGACGATTGCATGGTCTCCATCTGTAGGCGTTGCCCTCGATTTCCCAATCTCTCGCTTCAATAA 1527 52.72 MNSLLAFLSPLLPFLASLVFLVIFLEQISYLKKKRSVPGPPLVLPFVGNAIPLVRNPARFWEIQASLAKSSGHGFSVNYIAGNFIVFIRDTELSHKIFANVHSDAMNLVGHPFGKKLFGEDNLIYMLGQKHKDLRRRIAPNFTTKALSTYTALQQIIILKHLKIWDQKSSESSPKPIPLRFLARDLNLETSQMVFVGPYLGEEIRENFRTDYNLFNVGLMKLPIDLPGTGFRNARLAVDRLVEVLADCAKQSKAKMKREEEPSCLIDFWMQDTVKELEEAAAAGLPEPVHTSNFELGLYLFDFLFAAQDASTSSLLWAVSLLDSHPDVVAKVRDEVQSIWSPESDSLISSEQLAEMKYTQAVAREVVRYRAPATVVPHVAAANFPLTESYIIPKGAIVFPSAYESCQQGFVEPEQFDPERFSEERQEDRIFKRNFLAFGAGSHQCVGQRYALNHLVLFIAMFCTLLDFKRHRSDGCDEIAFNPTICPKDDCMVSICRRCPRFPNLSLQ 508
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 648809 650335 + CmoCh07G001150.1 Cmo07g00115 385423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g00115 508 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo07g00115 508 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo07g00115 508 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo07g00115 508 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo07g00115 508 PANTHER CYTOCHROME P450 61 14 495 - -
Cmo07g00115 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Cmo07g00115 508 SUPERFAMILY Cytochrome P450 30 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo07g00115 508 Pfam Cytochrome P450 38 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo07g00115 508 Gene3D Cytochrome P450 28 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo07g00115 508 PANTHER CYTOCHROME P450 26 14 495 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g00115 Cmo-Chr7:648809 Cmo14g02010 Cmo-Chr14:14732173 5.86E-32 dispersed
Cmo03g01385 Cmo-Chr3:10142287 Cmo07g00115 Cmo-Chr7:648809 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g00115 K09832 - csv:101221194 892.108