Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g00133 ATGGAGACAGAGCCTCTTCTTCCATATATGAGCCCAAGAGGGAAACCGCCTTCTCTGCCTCAATTATATCCACTCCCTGAAAATGATGAAATTATTCTCCCTATGACGCCCACGGAGTTCAAAGATCGCCTGATCTTTGGCCCTTCATCTTCCCCTCAAGATGCTTCTTCTGCGTTCGATGCTTTGACACTGTCTCTTGCCTCACCGAGACCCTCTGCTTCGTCTTCTCGTCAGGACCCATCTACCCCTTTGGACCCCAAATCCCAATCGCCGTCTCAACAGGGATGGCTTGTGGATTCGAAGCATTCATGCCACAAAAGCAACCTCCACCGTTCTAAAACAGCACCTGCCATGGCGGTCATAAATGATATCAACCATTCGCAGGAGCCCAAGCCACAATTTGGCAAACAATCTATAATCCGCCAAGCTGTTGTTCTTCTAATTATTTACTTATCATTGGGTGTGGTTATATATTGGATTAATCGCGATAATTTTTCAGCTTCGGAGACTCATCCCGTGGTCGATGCATTGTACTTTTGCATTGTAACGATGTGCACTATTGGGTATGGAGATATTACTCCAAATAGTGCAGCGACTAAGCTGTTCTCAGTTTTGTTTGTGTTGGTGGGCTTTGGGTTTATTGATATATTGCTGTCTGGAATGGTCAGTTATGTGCTTGATTTGCAGGAGAGTTATTTGTTAAGAAATGTGAAGAGGGGCGTGCAGCGTGAATCTGGGAAATCCTATATAATTGATGTGAAGAAGGGAAGAATGAGGATTAGAATGAAAGTGGCATTGGCCTTAGGTGTTGTGATACTTTGTATAGGAATTGGCATGGGTGTTATGCATTTTGTTGAGGACTTAGGGTGGTTGGATTCATTTTATCTTTCAGTCATGTCTGTGACAACCGTTGGATATGGTGATCAGGCGTTCAAGTCGATGACGGGTCGTATTTTCGCTTCAATCTGGTTGCTTGTATCGACCCTTGCTGTCGCTCGGGCGTTCCTTTATTTAGCAGAGGCAAGAGTGGATAAGCGGCATAGGATGATGGCAAAATGGATACTTGGTCAGGACATGACTGTCTCTGAGTTTCTTGCTGCTGATACCGACAACAATGGCTGTGTGAGTAGATCAGAATATGTGGTATACAAGCTGAAGGAGATGGGTAAGCTTCCTTGTGATTCCATGTCAGATGAAATGTTTAGAGATCTATTTTTCTCGAACCCTTTTCGAGACAGTGGGTTCGGGGACTCGGAAACAGCCAGGAATTTTGGGGTGTCGAATGAAATTTTGGGGACTCCGATGAGTTCTTGTGGGTCGTTGTCGTCTTCCGATGCTGGAGCTGAGGAAGATGGTTCTGGGAAAGAGAAGGAGAAGGCGATGAAAGACATGGAAGATGGTGGAGAGAGTTCCAAAGCTGCGAGCTATTACAGATGTACAACTCCGAACTGTGGAGTGAAGAAACGAGTAGAAAGATCGTTTCAAGATCCATCCATTGTAATCACGACGTACGAAGGGCAACACAACCACCCAATTGCGGCAATGCTGAGAGGAAATCTGTCGGCGGCCGCCGCATTTCCACCGTCCATGTTGGCACCAATGCCAGTGGTCGGTGGCGCTGGGTTTCTTCCGAAACCGTTGAGCGACCCATCCGGCAACAGTCAGGTTGTCGGCGGTGACGGCTACGTTTATTCACAGAGCAGCTTCGGAAAAGTCCTCGCCAAAGATGGGTGCAATCTCGCTTACTTGAAAACAACAAACGACCCACTGCGGAACTACCGTCTCAATTCTCAACGACAACTACGACCCATCATCGACTTCTTGGAGGCTAAAGGATCATTGGAGAACGACCCACCCTCCGACATTATACCCAATCTTGAAGGATCTCGAATGGAAGATTCGGAGGGAATCAAGCCCGGCCAGGTTTCTTTTCTGCTGGGCGTGATTCCAATTTTTGTTGCGTGGGTATACTCAGAGTTTCTGGAGTATCAGAAGGCTCCACCTATTATTAAAGTTCATTCAGACATTAATCTTGTTGAATTGGATGAGGAGAAAGGAGATAAAGTTAAAGATGACGAGGCTTCTCTACTGGAAGGAGGCCTTGCGAGATCAGCCTCTGCAAAGTTGCACAGTTCATCGATTAAAACAAACTTAATTAGGTTTTTGACATTGGATGAATCCTTCTTGCTGGAAAATCGAGCTACATTGCGAGCAATGTCTGAATTTGGGGTGATTCTTGTATATTTCTACATATGCGACCGCACAAATATACTGGGAGATTCTACGAAGGTGCTTGAACTTGATCTTGCCTCTTGTCCTATCGATACCAATATCTGGATTTTTATTGCACTCCGTTATATGAGGCTATCTAAATATATTTATGGTAGTTTTAAGTCATGGAAACTAAATGTTCTGATATTTATTGCTGCTTATGTGTGGATGACTGGATTTGGCAACTTCTCCTACTATTATATTAGAAAGGATTTTAGCTTGGCACGCTTTGCTCAGATGATGTGGCGGTTAAATTTCTTTGTCGCATTTTGCTGTATTGTTCTTAACAACGACTACATGTTGTACTACATCTGTCCAATGCATACACTTTTCACCCTCATGGTGTACGGAGCTCTTGGAATCTTTAACAAGTACAACGAGATAAGATCAGTCATGATTACAAAGATTCTTGCCTGCTTCCTTGTGGTTATTGCAGTTTGGGAAATTCCTGGAGTTTTTGAGATAATCTGGAGTCCATTAACATTTTTTTCATTCATGGCATATAAGTTATTAGTGTGTGAAGGGTATACCGATCCGGCAAAACCTGATCTCCCCAAACTGCATGAATGGCATTTTAGATCTGGTCTGGATCGCTATATCTGGATCATCGGCATGATCTATGCATACTATCACCCCAATGTTGAAAAATGGATGGAGAAGTTGGAGGAGGCTGAAACAAGGAAGAGAATTTCGATCAAGACAAGCATTGTTACCGTTTCTGTATTAGCTGGTTATATGTGGTACGAGTACATTTACAAGCTGGACAAGGTGACTTACAACAAATATCACCCTTACACATCATGGATTCCTATCACTGTTTACATTTGCTTGCGAAACTTTACACAGCAATTGCGAGGCTACTCTTTGACCCTCTTTGCGTGGCTTGGCAAGATTACATTGGAGACGTATATTTCACAGTTCCATATATGGTTGAGGTATGTTAAGATGCCCTTTATTACAGACAACTTACGAATAGAAAATGTACGTGGTGATTTTGTTCCATTATATCTTCAAGTTTGTACATTGTCTTTTTTGTGGTTGTACAGATCGAATGTGTCTAATGGACAGCCAAAGTGGCTTCTGTCGATCATTCCAGACTACCCGATGCTCAACTTCATGCTGACAACTGCTATCTATGTCATAGTCTCCCTTCGGATTTTTGAGTTAACCAATACTCTAAAGACAACTTTTGTACCTACAAAAGATAATAGACGGTTGTTGCATAATTTCCTTGCCGGAGCTGCAATTTCTGTATGTCTATACTGCATCTCGCTGGTTGTTGTTTTGATCCTTTATTAA 3570 43.25 METEPLLPYMSPRGKPPSLPQLYPLPENDEIILPMTPTEFKDRLIFGPSSSPQDASSAFDALTLSLASPRPSASSSRQDPSTPLDPKSQSPSQQGWLVDSKHSCHKSNLHRSKTAPAMAVINDINHSQEPKPQFGKQSIIRQAVVLLIIYLSLGVVIYWINRDNFSASETHPVVDALYFCIVTMCTIGYGDITPNSAATKLFSVLFVLVGFGFIDILLSGMVSYVLDLQESYLLRNVKRGVQRESGKSYIIDVKKGRMRIRMKVALALGVVILCIGIGMGVMHFVEDLGWLDSFYLSVMSVTTVGYGDQAFKSMTGRIFASIWLLVSTLAVARAFLYLAEARVDKRHRMMAKWILGQDMTVSEFLAADTDNNGCVSRSEYVVYKLKEMGKLPCDSMSDEMFRDLFFSNPFRDSGFGDSETARNFGVSNEILGTPMSSCGSLSSSDAGAEEDGSGKEKEKAMKDMEDGGESSKAASYYRCTTPNCGVKKRVERSFQDPSIVITTYEGQHNHPIAAMLRGNLSAAAAFPPSMLAPMPVVGGAGFLPKPLSDPSGNSQVVGGDGYVYSQSSFGKVLAKDGCNLAYLKTTNDPLRNYRLNSQRQLRPIIDFLEAKGSLENDPPSDIIPNLEGSRMEDSEGIKPGQVSFLLGVIPIFVAWVYSEFLEYQKAPPIIKVHSDINLVELDEEKGDKVKDDEASLLEGGLARSASAKLHSSSIKTNLIRFLTLDESFLLENRATLRAMSEFGVILVYFYICDRTNILGDSTKVLELDLASCPIDTNIWIFIALRYMRLSKYIYGSFKSWKLNVLIFIAAYVWMTGFGNFSYYYIRKDFSLARFAQMMWRLNFFVAFCCIVLNNDYMLYYICPMHTLFTLMVYGALGIFNKYNEIRSVMITKILACFLVVIAVWEIPGVFEIIWSPLTFFSFMAYKLLVCEGYTDPAKPDLPKLHEWHFRSGLDRYIWIIGMIYAYYHPNVEKWMEKLEEAETRKRISIKTSIVTVSVLAGYMWYEYIYKLDKVTYNKYHPYTSWIPITVYICLRNFTQQLRGYSLTLFAWLGKITLETYISQFHIWLRYVKMPFITDNLRIENVRGDFVPLYLQVCTLSFLWLYRSNVSNGQPKWLLSIIPDYPMLNFMLTTAIYVIVSLRIFELTNTLKTTFVPTKDNRRLLHNFLAGAAISVCLYCISLVVVLILY 1189
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 715010 730790 - CmoCh07G001330.1 Cmo07g00133 385441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g00133 1189 SUPERFAMILY WRKY DNA-binding domain 473 512 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cmo07g00133 1189 Gene3D - 234 358 - -
Cmo07g00133 1189 MobiDBLite consensus disorder prediction 67 97 - -
Cmo07g00133 1189 Gene3D - 136 233 - -
Cmo07g00133 1189 SUPERFAMILY Voltage-gated potassium channels 254 360 - -
Cmo07g00133 1189 ProSitePatterns EF-hand calcium-binding domain. 368 380 IPR018247 -
Cmo07g00133 1189 SMART WRKY_cls 464 512 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cmo07g00133 1189 Pfam 10 TM Acyl Transferase domain found in Cas1p 1117 1162 IPR012419 -
Cmo07g00133 1189 Pfam 10 TM Acyl Transferase domain found in Cas1p 803 1068 IPR012419 -
Cmo07g00133 1189 SUPERFAMILY Voltage-gated potassium channels 139 225 - -
Cmo07g00133 1189 PRINTS Two pore domain K+ channel signature 302 311 IPR003280 GO:0005267|GO:0016020|GO:0071805
Cmo07g00133 1189 PRINTS Two pore domain K+ channel signature 182 210 IPR003280 GO:0005267|GO:0016020|GO:0071805
Cmo07g00133 1189 MobiDBLite consensus disorder prediction 43 62 - -
Cmo07g00133 1189 MobiDBLite consensus disorder prediction 1 26 - -
Cmo07g00133 1189 MobiDBLite consensus disorder prediction 449 468 - -
Cmo07g00133 1189 Pfam WRKY DNA -binding domain 470 511 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cmo07g00133 1189 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 1101 1187 - -
Cmo07g00133 1189 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 631 1071 - -
Cmo07g00133 1189 MobiDBLite consensus disorder prediction 435 468 - -
Cmo07g00133 1189 Pfam Ion channel 270 339 IPR013099 -
Cmo07g00133 1189 Pfam Ion channel 146 225 IPR013099 -
Cmo07g00133 1189 Gene3D WRKY domain 455 513 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cmo07g00133 1189 ProSiteProfiles WRKY domain profile. 475 513 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cmo07g00133 1189 PANTHER PROTEIN REDUCED WALL ACETYLATION 1 1101 1187 - -
Cmo07g00133 1189 PANTHER PROTEIN REDUCED WALL ACETYLATION 1 631 1071 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g01375 Cmo07g00133 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g01374 Cmo-Chr3:10098164 Cmo07g00133 Cmo-Chr7:715010 4.73E-60 dispersed
Cmo03g01375 Cmo-Chr3:10101364 Cmo07g00133 Cmo-Chr7:715010 0 dispersed
Cmo07g00133 Cmo-Chr7:715010 Cmo18g00445 Cmo-Chr18:2928183 0 dispersed
Cmo03g01373 Cmo-Chr3:10089701 Cmo07g00133 Cmo-Chr7:715010 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
10064 PF07779 Cas1_AcylT 6.70E-48 CL0316 Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g00133 K03377 - csv:101215014 840.106