Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo07g00148 | ATGTCTGATTCAGCTCAGAAGAAGATGGGAAGAGGAAAGATTGAGATTAAGAGGATCGAAAATACAACAAACCGTCAAGTCACTTTCTGTAAGAGACGAAATGGACTTCTCAAAAAGGCTTATGAGCTTTCTGTTCTGTGTGATGCTGAAGTTGCTCTCATCGTTTTCTCAACCCGTGGCCGCCTCTATGAGTATGCTAACAACAGCTCTTTACCTTCCACCATTAGTCCAATCCCACTTCATCTCCTTCACATTTCCTCAATACAAACGTCAGTTGAACATAAAGAAACAGAAAGGCTTCAAGAATCAGCCGAAACAGAGAATGGCAATCCGATTCAAAAAGAAACTAAACTGGGGCTTCTTGATTTTAACAAAAATTTTGAATCTTTGACAGCCGCTGTAGCCACTGATGGAAATGGACGGCTGCGATGTACACAGTGTTTGAGACAAAGGGCTTTTACCGCCACTTATGTTTTCCAAGAGTTCTTTTTTTTTAGTTCTTGTGTTGTATCGAGGTGGATAAGAGGCGTGAAGACAACAATTGATAGATACAAAAAGGCATCTTCAAATTCTCCAAACACAGGATCTACTTCTGAAACTAACACTCAGGTACACTTCAATTTCAATTTCGTTACATGTGGAGAAATGGGGGATGTTGTTTCCAGGAACATGCTTGGTGATTCTCTAAGTTCTTTGAGTGTAAAAGATCTGAAAAGTCTTGAAAGCAAACTTGAGAAAGGAATTAGCAGAATTAGATCCAAAAAGGAGTTTGATTTGCACAACAACAATCAGCTGCTTCGAGCAAAGATAGCTGAGAGTGAAAGAAATGTCAACATGATGGAAGGAGGAGAATTTGAGCTGATGCAATCTCATCCCTACGATCCAAGAGACTTCTTCCAAGTCAACGGCTTACAACACAATCAACAATTGCATAAATTATATAAGTTTGGATTTAAGCTAGAGTTGAACGAGGCGACGAATGTCGATCGGGTAAGCGTCGGAGGGTCCTTGAGCGCTGTAAGCTCTTCTTCCAATAACGGAGTCAACGTAGATGAATCTTGCATCAGGCTGGTCTCTATTGAGTTGATTCACCAGCCCCTTCAGCCTGTTGTTAAACATCTGGTTTGCAGAGTTGTAGCCTTGATTACAAGTTCTCCCATCTGGGCTATTCGCCAGCGAGAATCGACGACTAGTCGAATAGACTTGGGGCATGAAATAGTTGTTAAGGTAATCATTGCTACCCAATCCAACAGAATATATACACCTGCCCAAGGAATCCTGTCTCCCTGTCACATACATACCCATAATCAAAGTCTTGGTAATAATCAAAGAGGGGCCGCGGGGGAAGTCGATGCCGTATGGGAGGCTTACATTGTGTACTTTGGAGAGCATTCCGGAGATAAGTCATGGGAGGAGATAGAAGAGAGGCACCATTCGTATTTGATGTCTGTAAAAGACACTGAAAACGATGCAAAATCCTCTCTTCTGTACAGCTACAAGCACACCATCAATGGGTTTGCTGCCGTGCTTACCCAACAACAAGCCTCCAAACTTTCAGGTGAATTTCAATTGGAGGAAGTGGTGTCTGTAATTGAGAGTAAAAAGTATGGCATGCACACGACAAGGTCGTGGGAGTTCTCTGGGGTTGAAGAAGATAAGCCCAGGCTTAGTGATTTGGTTTCTAAAGCCAAGGCTGGAAAAGATGTGGTGATTGGAATGCTTGACAGTGGTAATTGTGTTTCACTGTTTCTCATAAAGATAATTGGAGCTAGATATTATGTAAAGGGATATGAGCATCATTTTGGTCGTTTAAATGAAACGACGGACTTCCGATCACCGTGCGACATGGACGGCCATGGATCACACACCGCCTCCATTGCAGGTGGCCGGAGGGTCTACAACGTCTCGGCCTTCGGTGGCGTTGCACGGGGCACGGCCTCTGGTGGCGCCCCAGGGGTTCGATTGGCAATATACAAAGTTTGTTGGGCGATTCCCAACCAAATGAAAAGTCTGGGAAACGTTTGTTTCGACACTGACGTGCTGGCCGCCATGGATGATGCCATTTCCGATGGCGTCGACGTTCTCAGCTTGTCCATTGGAAAATCGGATCCGTACAATTACACCGATGACGGAATCGCCATCGGAGCTCTTCATGCCGTTAAAAGGGACATTGTGGTGTCTTGTAGCGCCGGAAATAGTGGGCCTACGCCGTCCACGTTGTCCAATGTTGCACCGTGGATCATCACTGTTGGAGCCAGCACCGTGGATCGGGAATTTTACTCTCCTGTCATCCTCGGAAATGGGTTGAAAATTAAGGGATTGTCGGTGGCGCCGTCCAAATTGAGGAGGAACAAAATGTACCCATTAGTGTATGCTGTCGATATACAAAAGCCACATGTTCCCCGAAACGAATCTGGATCATGTATTGCAGGCTCGCTTTCACACAAGAAAGCCAAAGGAAAGATAGTGTTGTGCTACAGAGGACAAGGAATCAGCAGATACGCCGGCAGCCTGGAAGTGAAAAGGTCCGGCGGTGCTGGAATGATACTCGGGCTCGTGCCGGCGGTGGGAGCGAGGCTGCACGCGGATCCCCATTTTGTTCCGGCAACGGCGGTGTCTTACGACGATGCAAATAGGATCCTTAAATATATAAAATCTCACCGTAATCCAACCGCCACTATTGTTCCACCCATCACCATCTACGGCTCCAGGCCGGCGCCGGCCATGGCCAATTTCACAAGTAGAGGTCCAAGCCTCGTCGACCCTCATTTTCTCAAGCCTGACATAACAGCACCTGGAGTGGACATATTAGCAGCATGGTCAGAAAAAGATTCCCCGACAAAACTCCCAAAATCCTTTGACCCTCGTATTGTGAAATACAATATCTACTCCGGCACTTCCATGTCCTGCCCTCACGTCTCCGCCGCCGCTGCCCTCCTCCGCGCCATCCACCCCACTTGGTCCCAAGCCGCCATCCGCTCAGCCCTGATGACCACCGCCACCACCACCAACAAATACGGCCACCCCATCACCGACGACTCCACCACCGACAACTCCCCTGCCACTCCTTTCTCCTTTGGGTCTGGCCACTTCCGCCCCACTAAGGCTGCGGACCCCGGGCTTGTGTACGACGCCAATTACACGGACTATCTCCACTACCTCTGCGGCCTGAAAATGAACTCCATTGACCGCTCCTTCAAGTGCCCTCCACGTGCCCTCCACCCCCACGATCTGAATTACCCTTCCATTGCTATCCCTAAACTGAAAGGCGGTGTGAGGATCAAAAGGACGGTGACCAACGTGGGCGGGGGAGGTAAAAGTGTGTACTTTTTCGAGAGCTGGGCGCCTCCGGGCGTGGCGGTGAGGGCTTCTCCCAGTGTATTGTACTTCGATAGGGTTGGGCAGAGGAAAAGGTTCACGATTACGGTGAGTGGGAAAGTGAAGGGTAATGGATACTCCTTCGGTTGGTTCGCTTGGAGTGATGGGGTTCACTATGTCAGAAGCCCAATTGCAATTTCTTCAACCTAA | 3528 | 47.85 | MSDSAQKKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNSSLPSTISPIPLHLLHISSIQTSVEHKETERLQESAETENGNPIQKETKLGLLDFNKNFESLTAAVATDGNGRLRCTQCLRQRAFTATYVFQEFFFFSSCVVSRWIRGVKTTIDRYKKASSNSPNTGSTSETNTQVHFNFNFVTCGEMGDVVSRNMLGDSLSSLSVKDLKSLESKLEKGISRIRSKKEFDLHNNNQLLRAKIAESERNVNMMEGGEFELMQSHPYDPRDFFQVNGLQHNQQLHKLYKFGFKLELNEATNVDRVSVGGSLSAVSSSSNNGVNVDESCIRLVSIELIHQPLQPVVKHLVCRVVALITSSPIWAIRQRESTTSRIDLGHEIVVKVIIATQSNRIYTPAQGILSPCHIHTHNQSLGNNQRGAAGEVDAVWEAYIVYFGEHSGDKSWEEIEERHHSYLMSVKDTENDAKSSLLYSYKHTINGFAAVLTQQQASKLSGEFQLEEVVSVIESKKYGMHTTRSWEFSGVEEDKPRLSDLVSKAKAGKDVVIGMLDSGNCVSLFLIKIIGARYYVKGYEHHFGRLNETTDFRSPCDMDGHGSHTASIAGGRRVYNVSAFGGVARGTASGGAPGVRLAIYKVCWAIPNQMKSLGNVCFDTDVLAAMDDAISDGVDVLSLSIGKSDPYNYTDDGIAIGALHAVKRDIVVSCSAGNSGPTPSTLSNVAPWIITVGASTVDREFYSPVILGNGLKIKGLSVAPSKLRRNKMYPLVYAVDIQKPHVPRNESGSCIAGSLSHKKAKGKIVLCYRGQGISRYAGSLEVKRSGGAGMILGLVPAVGARLHADPHFVPATAVSYDDANRILKYIKSHRNPTATIVPPITIYGSRPAPAMANFTSRGPSLVDPHFLKPDITAPGVDILAAWSEKDSPTKLPKSFDPRIVKYNIYSGTSMSCPHVSAAAALLRAIHPTWSQAAIRSALMTTATTTNKYGHPITDDSTTDNSPATPFSFGSGHFRPTKAADPGLVYDANYTDYLHYLCGLKMNSIDRSFKCPPRALHPHDLNYPSIAIPKLKGGVRIKRTVTNVGGGGKSVYFFESWAPPGVAVRASPSVLYFDRVGQRKRFTITVSGKVKGNGYSFGWFAWSDGVHYVRSPIAISST | 1175 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 816489 | 829416 | - | CmoCh07G001480.1 | Cmo07g00148 | 385456 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo07g00148 | 1175 | CDD | Peptidases_S8_3 | 536 | 1001 | IPR034197 | - | |
Cmo07g00148 | 1175 | PRINTS | Subtilisin serine protease family (S8) signature | 566 | 585 | IPR015500 | - | |
Cmo07g00148 | 1175 | PRINTS | Subtilisin serine protease family (S8) signature | 615 | 628 | IPR015500 | - | |
Cmo07g00148 | 1175 | PRINTS | Subtilisin serine protease family (S8) signature | 964 | 980 | IPR015500 | - | |
Cmo07g00148 | 1175 | Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) | 18 | 65 | IPR002100 | GO:0003677|GO:0046983 | |
Cmo07g00148 | 1175 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 586 | 1172 | IPR045051 | - | |
Cmo07g00148 | 1175 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 448 | 577 | IPR045051 | - | |
Cmo07g00148 | 1175 | Gene3D | - | 21 | 81 | IPR036879 | GO:0003677|GO:0046983 | |
Cmo07g00148 | 1175 | Pfam | Fibronectin type-III domain | 1077 | 1172 | IPR041469 | - | |
Cmo07g00148 | 1175 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT5.6 | 586 | 1172 | - | - | |
Cmo07g00148 | 1175 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT5.6 | 448 | 577 | - | - | |
Cmo07g00148 | 1175 | MobiDBLite | consensus disorder prediction | 1007 | 1025 | - | - | |
Cmo07g00148 | 1175 | ProSitePatterns | MADS-box domain signature. | 11 | 65 | IPR002100 | GO:0003677|GO:0046983 | |
Cmo07g00148 | 1175 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 965 | 975 | IPR023828 | - | |
Cmo07g00148 | 1175 | PRINTS | MADS domain signature | 31 | 46 | IPR002100 | GO:0003677|GO:0046983 | |
Cmo07g00148 | 1175 | PRINTS | MADS domain signature | 46 | 67 | IPR002100 | GO:0003677|GO:0046983 | |
Cmo07g00148 | 1175 | PRINTS | MADS domain signature | 11 | 31 | IPR002100 | GO:0003677|GO:0046983 | |
Cmo07g00148 | 1175 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 543 | 1037 | - | - | |
Cmo07g00148 | 1175 | Pfam | Peptidase inhibitor I9 | 457 | 536 | IPR010259 | - | |
Cmo07g00148 | 1175 | Gene3D | Peptidase S8/S53 domain | 548 | 1050 | IPR036852 | GO:0004252|GO:0006508 | |
Cmo07g00148 | 1175 | MobiDBLite | consensus disorder prediction | 1007 | 1026 | - | - | |
Cmo07g00148 | 1175 | CDD | PA_subtilisin_like | 763 | 894 | - | - | |
Cmo07g00148 | 1175 | ProSiteProfiles | MADS-box domain profile. | 9 | 69 | IPR002100 | GO:0003677|GO:0046983 | |
Cmo07g00148 | 1175 | CDD | MADS_MEF2_like | 10 | 69 | IPR033896 | GO:0000977|GO:0045944 | |
Cmo07g00148 | 1175 | Pfam | Subtilase family | 566 | 1029 | IPR000209 | GO:0006508|GO:0008236 | |
Cmo07g00148 | 1175 | Pfam | K-box region | 221 | 281 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Cmo07g00148 | 1175 | SUPERFAMILY | Subtilisin-like | 541 | 1041 | IPR036852 | GO:0004252|GO:0006508 | |
Cmo07g00148 | 1175 | Gene3D | - | 1054 | 1175 | - | - | |
Cmo07g00148 | 1175 | Gene3D | - | 756 | 901 | - | - | |
Cmo07g00148 | 1175 | SUPERFAMILY | SRF-like | 10 | 75 | IPR036879 | GO:0003677|GO:0046983 | |
Cmo07g00148 | 1175 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 446 | 539 | IPR037045 | - | |
Cmo07g00148 | 1175 | Pfam | PA domain | 787 | 880 | IPR003137 | - | |
Cmo07g00148 | 1175 | SMART | madsneu2 | 9 | 68 | IPR002100 | GO:0003677|GO:0046983 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo07g00148 | Cmo-Chr7:816489 | Cmo19g00850 | Cmo-Chr19:8248897 | 1.78E-178 | dispersed | |
Cmo17g01378 | Cmo-Chr17:10700561 | Cmo07g00148 | Cmo-Chr7:816489 | 3.05E-25 | dispersed | |
Cmo13g00604 | Cmo-Chr13:6645765 | Cmo07g00148 | Cmo-Chr7:816489 | 2.55E-30 | wgd | |
Cmo03g01352 | Cmo-Chr3:9999265 | Cmo07g00148 | Cmo-Chr7:816489 | 1.07E-37 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
10065 | PF00082 | Peptidase_S8 | 4.50E-42 | No_clan | Cmo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo07g00148 | - | - | csv:101217410 | 1229.54 |