Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g00173 ATGGAAGTTGCAAAGCTAAAGATGGTTCTGTTGCTGTTCGCCTTCATCTGGCTGGTTTCTGCTTCAGACAGTCATTTGTCTCCGAAAGGAGTAAACTATGAAGTGGCGGCTTTGATGTCAATGAAGAGTAGGATAAGGGACGAACGGAGAGTGATGGAAGGATGGGACATAAATTCGGTTGATCCATGCACCTGGTTTATGGTTGCTTGCTCTACCGAGGGCTTCGTGGTTTCTCTTGAGATGCCAAATATGGGCTTATCTGGAACGCTTTCCCCTAGCATTGGTAACCTGAGTCACCTTCGGACAATTGGATTCTTACATCTTAAACTTTGGCAGCCCTCTTATTTTGTGTTGACAATCTTGGCAATGGAAGTTGCAAAGCTAAAGATGGTTCTGTTGCTGTTCGCCTTCATCTGGCTGGTTTCTGCTTCAGACAGTCATTTGTCTCCGAAAGGAGTAAACTATGAAGTGGCGGCTTTGATGTCAATGAAGAGTAGGATAAGGGACGAACGGAGAGTGATGGAAGGATGGGACATAAATTCGGTTGATCCATGCACCTGGTTTATGGTTGCTTGCTCTACCGAGGGCTTCGTGGTTTCTCTTGAGATGCCAAATATGGGCTTATCTGGAACGCTTTCCCCTAGCATTGGTAACCTGAGTCACCTTCGGACAATGTTGTTGCAAAATAATGAGTTAACTGGTCCAATCCCAGATGACATAGGAGGACTTACAGAGCTTCAGACTCTTGACCTTTCCCACAACCAGATTGTCGGAGGCATTCCGAGTTCTTTGGGGTTTCTTACTCATTTGAATTACTTGAAGCTTAGTGGTAACAAGTTAAGTGGACCAATTCCGGAATCTGTTGCCAATATCTCAGGTCTTACCTTTTTGGATTTATCAAATAATAATCTCAGTGGCCCAACTCCGAGAATACTTTCCAAAGAGTACAGTGTTGCAGGGAATAGATTCCTTTGTGCATCTTCAGAATCTAAAGTGTGTGGAGGAGTATCAAAACCAGTTAATGAAACTGGTTCGCCTCAGAAAGATAATAGCCATCATCACTTGGCTCTTTCCATAGCTCTATTTGTCAGTTTCACGCTTGTGGTTTCTGTTGTGTTACTTGTTGGCTGGGTGCATTGTTATAGATCTCATCTTGTCTTCAAATCCAACGTGCAGCAAGATTATGAATTTGATATAGGCCATCTGAAAAGGTTTGCATTCCGTGAATTACAAAAGGCAACATGTAATTTTAGTCCCCAAAATATCGTGGGACAGGGTGGTTTTGGTGTAGTTTATAAAGGGTATCTTCCAAATGGGACATATGTTGCGGTGAAGAGACTGAAAGATCCAAATTATACTGGAGAAGTGCAGTTTCAAACTGAAGTTGAAATGATTGGCTTAGCAGTGCACCGCAACCTCTTGCGTTTGTATGGCTTTTGTATGACGCCACATGAAAGGCTGCTTGTTTATCCATATATGCCAAATGGGAGTGTCGCTGACCGCCTCAGAGATGCAGGCCAAGAGAAACCATCGTTGAATTGGAACAGAAGACTGCGTATTGCCCTTGGTGCAGCACGTGGACTAGTATACTTGCACGAGCAGTGTAACCCAAAAATTATTCACCGGGATGTAAAAGCTGCAAATATTCTTCTAGATGAAAGCTTTGAAGCCGTGGTTGGGGATTTTGGTCTGGCAAAGATGTTGGATAGAAGGGACTCACATGTTACTACAGCAGTTAGGGGCACAGTGGGGCATATCGCCCCCGAATACCTTTCAACTGGACAATCTTCAGAAAAGAGTGATGTTTTTGGGTTTGGCATATTGGTTCTTGAACTCTTAACAGGGCCAAAAGCAGTAGATGCTGGCAATGCTCAGGTGGTTCGAAAGGGAACGATTCTCGAATGGGTTAGAACGTTACATGAGGAGAAGAGGCTAGATGAGATGGTGGACAGGGATCTAAGAGGGTGTTTTGATGCAGTGGAGCTGGACAAAGCTGTAGAATTGGCTCTGCAGTGTACTCAGTCGCATCCACAACTCAGACCAAAGATGTCCGAGATTCTTAAGGTTTTAGAAGGTCTTGTTGGAGAGTTGAGCCAAATCGAGGAATCACCAGGCGGAGCAGCAAGTCTTTATGAGGACAGAGCTCATAGTTTCTCCCGGAATTACAGTGATATTCATGAAGAGTCTTCATTCGTTGTGGAAGCCATGGAGCTGTCGGGACCTCGATGA 2229 44.37 MEVAKLKMVLLLFAFIWLVSASDSHLSPKGVNYEVAALMSMKSRIRDERRVMEGWDINSVDPCTWFMVACSTEGFVVSLEMPNMGLSGTLSPSIGNLSHLRTIGFLHLKLWQPSYFVLTILAMEVAKLKMVLLLFAFIWLVSASDSHLSPKGVNYEVAALMSMKSRIRDERRVMEGWDINSVDPCTWFMVACSTEGFVVSLEMPNMGLSGTLSPSIGNLSHLRTMLLQNNELTGPIPDDIGGLTELQTLDLSHNQIVGGIPSSLGFLTHLNYLKLSGNKLSGPIPESVANISGLTFLDLSNNNLSGPTPRILSKEYSVAGNRFLCASSESKVCGGVSKPVNETGSPQKDNSHHHLALSIALFVSFTLVVSVVLLVGWVHCYRSHLVFKSNVQQDYEFDIGHLKRFAFRELQKATCNFSPQNIVGQGGFGVVYKGYLPNGTYVAVKRLKDPNYTGEVQFQTEVEMIGLAVHRNLLRLYGFCMTPHERLLVYPYMPNGSVADRLRDAGQEKPSLNWNRRLRIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKMLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKSDVFGFGILVLELLTGPKAVDAGNAQVVRKGTILEWVRTLHEEKRLDEMVDRDLRGCFDAVELDKAVELALQCTQSHPQLRPKMSEILKVLEGLVGELSQIEESPGGAASLYEDRAHSFSRNYSDIHEESSFVVEAMELSGPR 742
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 916091 921348 - CmoCh07G001730.1 Cmo07g00173 385481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g00173 742 ProSitePatterns Serine/Threonine protein kinases active-site signature. 539 551 IPR008271 GO:0004672|GO:0006468
Cmo07g00173 742 SUPERFAMILY L domain-like 33 113 - -
Cmo07g00173 742 Gene3D Transferase(Phosphotransferase) domain 1 493 699 - -
Cmo07g00173 742 ProSiteProfiles Protein kinase domain profile. 417 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo07g00173 742 SMART serkin_6 417 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo07g00173 742 ProSitePatterns Protein kinases ATP-binding region signature. 423 445 IPR017441 GO:0005524
Cmo07g00173 742 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 130 742 - -
Cmo07g00173 742 Pfam Protein kinase domain 420 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo07g00173 742 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 9 104 - -
Cmo07g00173 742 Pfam Leucine rich repeat N-terminal domain 154 193 IPR013210 -
Cmo07g00173 742 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Cmo07g00173 742 Gene3D Ribonuclease Inhibitor 30 114 IPR032675 -
Cmo07g00173 742 SUPERFAMILY L domain-like 155 315 - -
Cmo07g00173 742 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 130 742 - -
Cmo07g00173 742 Gene3D Ribonuclease Inhibitor 153 335 IPR032675 -
Cmo07g00173 742 Gene3D Phosphorylase Kinase; domain 1 386 492 - -
Cmo07g00173 742 SUPERFAMILY Protein kinase-like (PK-like) 400 691 IPR011009 -
Cmo07g00173 742 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 104 - -
Cmo07g00173 742 Pfam Leucine rich repeat 217 256 IPR001611 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g01329 Cmo07g00173 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g00173 Cmo-Chr7:916091 Cmo05g00035 Cmo-Chr5:125060 1.50E-23 dispersed
Cmo11g00145 Cmo-Chr11:731029 Cmo07g00173 Cmo-Chr7:916091 2.59E-07 dispersed
Cmo18g00100 Cmo-Chr18:681892 Cmo07g00173 Cmo-Chr7:916091 2.40E-07 dispersed
Cmo03g01329 Cmo-Chr3:9910217 Cmo07g00173 Cmo-Chr7:916091 1.10E-47 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74445 PF00069 Pkinase 5.50E-43 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g00173 - - mcha:111012268 1120.53