Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g00184 ATGGCTGAGGTTCACTGTAGCAACACTGGTGGAATTAAGCTCTTTGGCACCGTCATCACTTTACAGACCAGAAGCATCAAGGAGGAGCCGGAGAAAGGTGGTGACGGTGGCGGTGGCGATCAACCAGAGATGAAGAGGCCGGAGAAAATAATTCCATGTCCTAGATGTAAGAGCATGGACACCAAATTCTGTTACTTCAACAATTACAATGTTAATCAGCCCAGACATTTCTGCAAGGGTTGTCAAAGGTACTGGACGGCAGGTGGGGCGCTACGGAACGTGCCCATCGGAGCCGGCCGCCGGAGAGCCAAGCCGCCGCTGCCTAATTGTCGAATCCTTTCCGGAGAGCTTCCCGAGGATTATGGGCAGCTTTACGATGCTGCTTCTGGGATTATTCATCAGCTTGAATTGGATGCGGTGGAGGGGTGGCATCTCACGGTGGCAGAACAGGATTTCGCCCAAGTTTTTCCTCTCAAACGCCAGAAGATTATCGGTCAACACGGCCAAACGTCCTGA 516 52.13 MAEVHCSNTGGIKLFGTVITLQTRSIKEEPEKGGDGGGGDQPEMKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPEDYGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKIIGQHGQTS 171
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 956095 956610 + CmoCh07G001840.1 Cmo07g00184 385492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g00184 171 PANTHER DOF ZINC FINGER PROTEIN DOF1.5-LIKE 8 164 - -
Cmo07g00184 171 ProSitePatterns Zinc finger Dof-type signature. 53 89 IPR003851 GO:0003677|GO:0006355
Cmo07g00184 171 MobiDBLite consensus disorder prediction 25 47 - -
Cmo07g00184 171 Pfam Dof domain, zinc finger 49 104 IPR003851 GO:0003677|GO:0006355
Cmo07g00184 171 ProSiteProfiles Zinc finger Dof-type profile. 51 105 IPR003851 GO:0003677|GO:0006355
Cmo07g00184 171 PANTHER CYCLIC DOF FACTOR 2 8 164 IPR045174 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo07g00184 Cmo13g00632 CCT
Cmo07g00184 Cmo18g00391 CCT
Cmo03g01322 Cmo07g00184 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g00184 Cmo-Chr7:956095 Cmo14g00534 Cmo-Chr14:2711508 1.01E-37 dispersed
Cmo13g00632 Cmo-Chr13:6799304 Cmo07g00184 Cmo-Chr7:956095 2.13E-54 wgd
Cmo18g00391 Cmo-Chr18:2529359 Cmo07g00184 Cmo-Chr7:956095 5.63E-52 wgd
Cmo03g01322 Cmo-Chr3:9881323 Cmo07g00184 Cmo-Chr7:956095 2.19E-107 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
10070 PF02701 zf-Dof 1.20E-31 No_clan Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g00184 - - cmax:111496951 328.176