Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g00202 ATGGGTTCTGGAGACTGGTTTAAGACAGTAATTCGCTTAAGGAAAGTAAAAACCAGCAGTTCAAAACATGCTAAGGAGAAATCAAATGCTTTGAAATCGAATAATCTGGAAAAAGATTCCTCGAAGGTTAAAAAGAGTGGTACCAATGGGAGCAACAAGTCTATTGGGATGCCAATTGAAGACGTTGCTGCAGTTCGGATTCAGACTGCATATCGAGCTTATCGTGCCAGGAAAATTTTACGTCGCTTGAAAGGAGCTGTGAGACTGCAGAATCTGACTCAAGGCCACTCTGTTAGAAGGCATGCTACATCTACAATAAGTTATCTTCATTCATGGAGCAATATACAGGCTCAAATTAGGGCTCGTCGAATCTGTATGGTGACTGAAGGACGCCTCAAACAAAAGAGATTGGAGAATCAACGAAAACTTGAGACTAAACTTCATGATATTGAGGTAGAGTGGTGTGGCGGTGCAGACACCATGGAGGAGATTCTTTCAAGGGTACACGAGAGAGAAGAAGCAGCTGTTAAGCGTGAACGTGCTATGGCATATGCATTCTCACATCAGTGGAGAGCAAACTCCAGTGAGATGTATGGACTGGGTAAAGATGAACTTGGTAAAGCTGATTGGGGTTGGAGCTGGAAAGAACGATGGATTGCTGCTCGTCCATGGGAGAGCCGCGTACCATCTAAGTTCGTTACTCCAAAGAAATCGACAATGAGACAATCAAGCAAAGCCAGTAAGAAAAGCTCTCCATCCCCAAAAGCAAGAGTTTTGGTTAAACCTCCTTCCCCGAATGGAAAATCAACTCCAAAGGCTCGAAGGTTGTCGTATCCAGCAACCGAGAAAACCGATAAACTGGCTACAGAAGAAAAGGGCATCAAGAAAAGCGTTAAAGATGATGAAGCAAACACTAAGAAAGAAGAAACAACGTCCTAA 939 43.34 MGSGDWFKTVIRLRKVKTSSSKHAKEKSNALKSNNLEKDSSKVKKSGTNGSNKSIGMPIEDVAAVRIQTAYRAYRARKILRRLKGAVRLQNLTQGHSVRRHATSTISYLHSWSNIQAQIRARRICMVTEGRLKQKRLENQRKLETKLHDIEVEWCGGADTMEEILSRVHEREEAAVKRERAMAYAFSHQWRANSSEMYGLGKDELGKADWGWSWKERWIAARPWESRVPSKFVTPKKSTMRQSSKASKKSSPSPKARVLVKPPSPNGKSTPKARRLSYPATEKTDKLATEEKGIKKSVKDDEANTKKEETTS 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1025018 1028283 - CmoCh07G002020.1 Cmo07g00202 385510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g00202 312 PANTHER IQ-DOMAIN 9 1 285 - -
Cmo07g00202 312 MobiDBLite consensus disorder prediction 231 312 - -
Cmo07g00202 312 MobiDBLite consensus disorder prediction 22 44 - -
Cmo07g00202 312 MobiDBLite consensus disorder prediction 278 312 - -
Cmo07g00202 312 MobiDBLite consensus disorder prediction 232 251 - -
Cmo07g00202 312 PANTHER IQ-DOMAIN 5-RELATED 1 285 - -
Cmo07g00202 312 Gene3D - 60 106 - -
Cmo07g00202 312 ProSiteProfiles IQ motif profile. 82 111 IPR000048 GO:0005515
Cmo07g00202 312 MobiDBLite consensus disorder prediction 17 55 - -
Cmo07g00202 312 ProSiteProfiles IQ motif profile. 60 88 IPR000048 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g00202 Cmo-Chr7:1025018 Cmo16g00447 Cmo-Chr16:2143563 8.68E-72 dispersed
Cmo07g00202 Cmo-Chr7:1025018 Cmo10g00895 Cmo-Chr10:4380090 1.25E-47 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g00202 - - cmax:111497513 588.956