Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo07g00219 | ATGTGTTTTGGTGTGCAGCCTATTGACTCAACACTCCTGAAGCTGCTGATCCCTGTAGCTTTCTGTCACGCACTTGGCCACGTCACTAGCAATGTCTCATTCGCAGCTGTTGCTGTCTCATTCACACACACAATCAAAGCTTTGGAACCGTTCTTTAACGCCGCCGCTTCTCAATTCATTTTGGGGCAATCCATTCCCATTACCTTGTGGCTTTCATTGGCTCCCGTTGTCATTGGTGTATCAATTGCATCTTTGACTGAGCTTTCATTCAACTGGACTGGCTTCATTAGTGCTATGATTTCTAATATCTCATTTACCTACAGAAGTATTTATTCAAAGAAAGCCATGACTGACATGGACAGCACCAACGTCTATGCCTATATTTCTATCATCGCTCTCCTTTTCTGCATTCCACCAGCTGTAATTGTGGAGGGGCCTCAACTGCTGAAGTTTGGTTTCAATGATGCCATAGCTAAAGTTGGTCTAACCAAATTCGTCTCAGATCTCTTCTGGGTGGGAATGTTTTATCACCTTTACAATCAGTTAGCAACCAACACACTGGAGAGGGTGGCACCACTTACCCATGCAGTTGGAAATGTGCTGAAACGTGTAACAAAATTTCAACACAGACTGGTATTGGAACCTGCATTGCAATTGCAGGAGTTGCACTTTACTCTTTCATCAAGGCTAAGATGGAAGAAGAGAAACGAGTGA | 714 | 43.7 | MCFGVQPIDSTLLKLLIPVAFCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSIASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNVYAYISIIALLFCIPPAVIVEGPQLLKFGFNDAIAKVGLTKFVSDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVTKFQHRLVLEPALQLQELHFTLSSRLRWKKRNE | 237 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 1098417 | 1099843 | + | CmoCh07G002190.1 | Cmo07g00219 | 385527 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo07g00219 | 237 | PANTHER | BNAC02G47130D PROTEIN | 9 | 205 | - | - | |
| Cmo07g00219 | 237 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 7 | 86 | - | - | |
| Cmo07g00219 | 237 | Pfam | Triose-phosphate Transporter family | 6 | 205 | IPR004853 | - | |
| Cmo07g00219 | 237 | PANTHER | SOLUTE CARRIER FAMILY 35 | 9 | 205 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cmo03g01286 | Cmo07g00219 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo07g00219 | Cmo-Chr7:1098417 | Cmo18g01131 | Cmo-Chr18:11626770 | 7.56E-121 | dispersed | |
| Cmo07g00219 | Cmo-Chr7:1098417 | Cmo03g01286 | Cmo-Chr3:9742436 | 2.72E-138 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo07g00219 | K15283 | - | csv:101220728 | 386.726 |