Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g00286 ATGATGGAGATGGGCAGTTTCAGTTTAGGAAGGATTTTCTACCTCGCCTTAGTTATTGCACAATTGATGTCTACCACAATTTCTCAGCCGGAATTTTTATCACATAAATGTTCAGAGAACGCTAACTACACCAACAACAGCCCTTTCAAGAAAAATCTCGACAACGTACTCGCCTTAATCACCTCCAACTCCCACACCGACACCCGGGTCGACTACGGTTTCTATAATGCCACCTTCGGTGAAGATCCCGACACAGCCAACGCTAAGGTTCTTTGTCGTAAAGGCGTTCCCTTGGAGGACTGCAGATCATGCGTGAAGGAATCAGCCATCAGGATTGTACAAGACTGTCCAAACCAGAAGGAAGGTGTGGGATGGTACAGTAATTGCCAAATACTTTACTCAAACAACTCTGTTCACGGTGAGATAAGCATCAATTCCGCGTCGCGAATTGCTTACAACGCCGCTCAGGCCCCGGATGCGATCAGTTTCAATGAGAAACGGAGAGAGTTGTTAGATCGACTCCGAGAGGAGGCTGCGTCAGGGACTTCAATTCGCAAGTCTGCCGGCGGATATGTCAAACTTGAAAGTCCGAATACGTATACCATATATGGCCTTGTCGATTGTTTCCCCGACATGTCGTACTTCAATTGTGATGTCTGTCTCAGTCGTCTTCAAAGTAATCTTCCTAGTTGTTGTAACGGCAGCATAGGGGCGAGATTAACTGTGACAAGTTGTCAAATAAACTACGAAATCCACCCTCTCTATGCGGCACTTCTCTCTCCTCCTCCTCCTCTGCCGCCGCCCTCAGCTCCTAATCTCCTCCCTCCATCTTCGCCTTCGACACTAGAAAATAATGGCAATACTACTAGAACTGTTATAATTGTTGTGGTGTCCATCGTTTCAGCCATCATTATCATCGTTGGCATTTGCATCGTTGCGAGATGGAGGAAGCGAAAGCACAGAAGACCATTACAAAATCTTGAAACTGTTGCTCATGGAGACGCCACTGATGAAATTAGCGGGGTGGAGACGATTCAATTTAATTTTGACACAATTAAAGAGGCAACTGATGACTTCTCAAACGAAAACAAGCTGGGACAGGGTGGATTCGGAGCTGTTTACAGGGGTAAGCTTCCTAATGGACAGCATATTGCGGTGAAGCGGCTTGCGAACAATTCACAACAAGGCGACGTTGAATTCAAAAATGAAGTCCTTTTGGTGGTGAAGCTTCAGCACCGGAACTTGGTTAGGCTGCTGGGTTTCTGCTTGCAAGGAATCGAAAGACTTCTCATATATGAGTTTGTACCAAATGGCAGCCTTGACCACTTCATATTTGATTTTGGAAAGCGGACAGAGTTAAGTTGGGAAAGACGGTACAAAATCATAAACGGCATTGTACGAGGACTTATTTATCTTCACGAAGACTCTCGTCTTCGAATCATACACCGTGATCTCAAAGCTAGCAATATTTTGTTGGATATAGAAATGAATCCAAAGATTGCGGATTTTGGTATGGCAAGATTGTTCGATGTAGATGAAACTCAAGGCAACACAAGTAGAGTTGTGGGAACTTACGGTTATATGGCTCCAGAGTATATACTTTACGGACAATTTTCAATAAAATCAGATGTCTTTAGTTTTGGTATTTTGGTTCTTGAAATTTTGAGTGGTAAAAAAGGTACTTGTTTTCGCAATGGAGAAAATGTCGAGGATCTCTCCAGCTTTGCATGGAATAATTGGAGGGTAGGAACAACTACAAATATCATAGATTCAACACTTGATGTTGGTTCAAGGATCGAAATGATAAGATGCATTCACATTGGTTTATTGTGTGTTCAAGAAAACGTAGCAGATCGACCAACAATGGCTACAGTGCTCATGATGCTAAGTAGTTCTTCTCTCACTCTCCCTATACCCTCTAAACCTGCATTCTTCATGCATAGTATCACCAATGAATCCAACACAATGTTAAAGCCAAATAGGGGTACTCATTCGGAAGCCAAATCTCTTCAAACTTCTGATAATGACATTTCAATTTCGGAGTTTCATCCTCGTTAG 2058 43.15 MMEMGSFSLGRIFYLALVIAQLMSTTISQPEFLSHKCSENANYTNNSPFKKNLDNVLALITSNSHTDTRVDYGFYNATFGEDPDTANAKVLCRKGVPLEDCRSCVKESAIRIVQDCPNQKEGVGWYSNCQILYSNNSVHGEISINSASRIAYNAAQAPDAISFNEKRRELLDRLREEAASGTSIRKSAGGYVKLESPNTYTIYGLVDCFPDMSYFNCDVCLSRLQSNLPSCCNGSIGARLTVTSCQINYEIHPLYAALLSPPPPLPPPSAPNLLPPSSPSTLENNGNTTRTVIIVVVSIVSAIIIIVGICIVARWRKRKHRRPLQNLETVAHGDATDEISGVETIQFNFDTIKEATDDFSNENKLGQGGFGAVYRGKLPNGQHIAVKRLANNSQQGDVEFKNEVLLVVKLQHRNLVRLLGFCLQGIERLLIYEFVPNGSLDHFIFDFGKRTELSWERRYKIINGIVRGLIYLHEDSRLRIIHRDLKASNILLDIEMNPKIADFGMARLFDVDETQGNTSRVVGTYGYMAPEYILYGQFSIKSDVFSFGILVLEILSGKKGTCFRNGENVEDLSSFAWNNWRVGTTTNIIDSTLDVGSRIEMIRCIHIGLLCVQENVADRPTMATVLMMLSSSSLTLPIPSKPAFFMHSITNESNTMLKPNRGTHSEAKSLQTSDNDISISEFHPR 685
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1398653 1401537 - CmoCh07G002860.1 Cmo07g00286 385594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g00286 685 SUPERFAMILY Protein kinase-like (PK-like) 347 661 IPR011009 -
Cmo07g00286 685 Pfam Salt stress response/antifungal 158 250 IPR002902 -
Cmo07g00286 685 Pfam Salt stress response/antifungal 37 135 IPR002902 -
Cmo07g00286 685 Gene3D Transferase(Phosphotransferase) domain 1 435 635 - -
Cmo07g00286 685 Gene3D - 29 137 IPR038408 -
Cmo07g00286 685 Gene3D - 146 253 IPR038408 -
Cmo07g00286 685 MobiDBLite consensus disorder prediction 655 685 - -
Cmo07g00286 685 CDD STKc_IRAK 365 629 - -
Cmo07g00286 685 ProSiteProfiles Protein kinase domain profile. 359 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo07g00286 685 SMART serkin_6 359 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo07g00286 685 ProSitePatterns Protein kinases ATP-binding region signature. 365 387 IPR017441 GO:0005524
Cmo07g00286 685 Pfam Protein kinase domain 360 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo07g00286 685 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 13 668 - -
Cmo07g00286 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
Cmo07g00286 685 ProSiteProfiles Gnk2-homologous domain profile. 31 138 IPR002902 -
Cmo07g00286 685 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 13 668 - -
Cmo07g00286 685 ProSiteProfiles Gnk2-homologous domain profile. 145 254 IPR002902 -
Cmo07g00286 685 Gene3D Phosphorylase Kinase; domain 1 325 434 - -
Cmo07g00286 685 MobiDBLite consensus disorder prediction 655 679 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo07g00286 Cmo13g00734 CCT
Cmo03g00537 Cmo07g00286 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00539 Cmo-Chr3:5452631 Cmo07g00286 Cmo-Chr7:1398653 9.41E-153 dispersed
Cmo03g00541 Cmo-Chr3:5458551 Cmo07g00286 Cmo-Chr7:1398653 5.58E-80 dispersed
Cmo07g00286 Cmo-Chr7:1398653 Cmo13g00729 Cmo-Chr13:7267058 0 dispersed
Cmo07g00284 Cmo-Chr7:1392041 Cmo07g00286 Cmo-Chr7:1398653 1.44E-42 proximal
Cmo07g00285 Cmo-Chr7:1395425 Cmo07g00286 Cmo-Chr7:1398653 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74451 PF00069 Pkinase 1.80E-46 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g00286 - - cmo:103484586 950.658