Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g00292 ATGATCTCTTCACTCAGCCTATCTTCTACTTTCGCTTCCTCTGAACTTCTCAACCGAAAATCTCCGATTCCGAGGCTGAATCTTCCGGCGCAGTTTCCGAATCGCAATGCCCTCAAACATCTCGATCGATCTTTTTCTATCAACAAACCACTTCACATCTCATCCGTTGATAATCTTTCTTTGCCCGTAAAATCGTTTGGGCGTTCGACGGAATGCAGGGCGTACGAGGCCGATTCGCGGCGTTTGCAGATTAACGTTGAACTTCCTGAAGAACAGGCAGGTCAGAAACTTAAGATTGGGCTGTATTTCGCCACTTGGTGGGCTTTGAATGTGGTGTTCAATGTATACAACAAGAAGGTTCTTAATGCGTTCCCTTATCCATGGCTCACCTCCACTCTCTCCCTCGCCGCTGGATCGTTTATGATGCTCGTTTCTTGGGCCACTAGAATGGTGGACGCTCCAAAAACCGATTTGGATTTCTGGAAATCCCTGTTGCCGGTGGCGGTGGCGCATACTATTGGGCATGTTGCAGCAACTGTGAGCATGTCCAAAGTCGCTGTCTCATTCACTCACATAATCAAGAGTGGGGAGCCGGCTTTCAGTGTGTTGGTCTCCAGGTTTCTGTTGGGCGAGATGTTTCCATTGCCTGTTTACTTATCTCTTATCCCTATCATTGGAGGCTGCGCTCTTTCCGCACTAACTGAGCTCAATTTCAACATGACTGGATTCATGGGAGCGATGATATCGAACTTGGCATTTGTGTTTAGAAACATATTCTCAAAGAAAGGGATGAAGGGGAAGTCAGTGAGTGGGATGAATTACTATGCTTGCCTTTCAATGCTGTCTCTGCTCATTCTTACTCCTTTCGCCATTGCTGTGGAGGGACCCAAGTTGTGGGCTGAAGGATTTCAACAGGCTCTCTCTCAAATTGGTCCCAATTTCATTTGGTGGTTGGTAGCTCAAAGTATGTTCTACCACTTGTACAATCAAGTGTCATACATGTCTCTTGATCAGATATCTCCATTGACATTCAGCGTAGGGAACACAATGAAGAGAATATTCGTAATAGTGTCGTCCATTATCATCTTCCGCACGCCTGTCCGACCCATCAACGCCATTGGAGCTGCCATTGCAATCCTTGGAACCTTCCTCTACTCGCAGGCCAAGCTGTGA 1173 46.89 MISSLSLSSTFASSELLNRKSPIPRLNLPAQFPNRNALKHLDRSFSINKPLHISSVDNLSLPVKSFGRSTECRAYEADSRRLQINVELPEEQAGQKLKIGLYFATWWALNVVFNVYNKKVLNAFPYPWLTSTLSLAAGSFMMLVSWATRMVDAPKTDLDFWKSLLPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEMFPLPVYLSLIPIIGGCALSALTELNFNMTGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSMLSLLILTPFAIAVEGPKLWAEGFQQALSQIGPNFIWWLVAQSMFYHLYNQVSYMSLDQISPLTFSVGNTMKRIFVIVSSIIIFRTPVRPINAIGAAIAILGTFLYSQAKL 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1429581 1431930 + CmoCh07G002920.1 Cmo07g00292 385600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g00292 390 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 97 389 IPR004696 GO:0016021|GO:0022857|GO:0055085
Cmo07g00292 390 Pfam Triose-phosphate Transporter family 97 386 IPR004853 -
Cmo07g00292 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 290 387 - -
Cmo07g00292 390 PANTHER SOLUTE CARRIER FAMILY 35 37 389 - -
Cmo07g00292 390 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 37 389 - -
Cmo07g00292 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 139 234 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g00550 Cmo07g00292 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01194 Cmo-Chr1:9681913 Cmo07g00292 Cmo-Chr7:1429581 0 dispersed
Cmo03g01286 Cmo-Chr3:9742436 Cmo07g00292 Cmo-Chr7:1429581 7.32E-69 dispersed
Cmo07g00292 Cmo-Chr7:1429581 Cmo09g00935 Cmo-Chr9:4905641 0 dispersed
Cmo07g00292 Cmo-Chr7:1429581 Cmo03g00550 Cmo-Chr3:5496170 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g00292 K15283 - csv:101216621 647.121