Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g00331 ATGGCAAACGAAACAGAAACAGAAACAGAAACAGAGGAGCTGGATTCAGTTGAGAAAGAAAGAACAATTAAAGTGGTTCCCTCTTTACAAAAAAGAGAGATGAATTCTGAAATGGAAAATATGGAAAGGAGAAGGTTTGATAGTTTGGAATCGTGGTCGATGATCCTAGAGTCTGAAAATATGGAAACTTGGGAGACATCAAAGGAGGATCAGGAGGAGTGGACAGCTGATCTCTCTCAGCTCTTCATTGGCAACAAATTTGCCTCCGGTGCGCACAGTCGGATATACCGTGGAATTTATAAGCAGAGAGCCGTTGCTGTGAAGATGGTCAGAATTCCAAACCAAAAGGAGGAAACAAGAGTCAAACTTGAGCAACAATTCAAGTCTGAAGTTGCCTTGCTTTCTCGTCTCTTTCATCCCAGCATAGTTCAGTTCATTGCAGCCTGTAAAAAGCCACCGGTATACTGCATAATTACAGAGTATATGTCACAAGGAACTCTGAGAATGTATCTTAACAAGAAAGAGCCATATTCACTGTCAATAGAGACAATACTGAGGCTAGCTCTAGACATATCAAGAGGAATGGAATACCTTCATTCCCAAGGGGTAATCCACAGAGACCTTAAATCAAATAACTTGCTTCTAAACGATGAAATGAGAGTAAAAGTAGCGGATTTTGGAACCTCCTGCCTCGAAACACAGTGTCGAGAAACAAAAGGGAACATGGGAACTTACAGATGGATGGCGCCGGAGATGATTAAAGAGAAGCCTTACACTCGCAAAGTTGATGTGTACAGCTTTGGGATTGTGCTGTGGGAGCTCACCACGGTTCTGCTTCCGTTTCAAGGGATGACTCCCGTGCAGGCTGCCTTTGCCGTCGCCGAGAAGAACGAGAGGCCGCCATTGCCGGCAAGTTGTCAACCGGCTTTAGCACACCTGATAAAGCGGTGTTGGGCGGCGAATCCATCGAAGCGGCCGGATTTCAGCGACATTGTAGCGGCTTTGGAGAAATACGACGAGTGCGTGAAAGAGGGTCTTCCACTTGCACACCATAAAGGATTGGTAAACCGAAACGCCATTATTGAACGCTTGCAAGCTTGCGCCTCAACCAGTTCTTCAATACCTGTACATGCCTGA 1137 45.29 MANETETETETEELDSVEKERTIKVVPSLQKREMNSEMENMERRRFDSLESWSMILESENMETWETSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQKEETRVKLEQQFKSEVALLSRLFHPSIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSIETILRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTVLLPFQGMTPVQAAFAVAEKNERPPLPASCQPALAHLIKRCWAANPSKRPDFSDIVAALEKYDECVKEGLPLAHHKGLVNRNAIIERLQACASTSSSIPVHA 378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1551809 1554139 + CmoCh07G003310.1 Cmo07g00331 385639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g00331 378 PRINTS Tyrosine kinase catalytic domain signature 243 253 IPR001245 GO:0004672|GO:0006468
Cmo07g00331 378 PRINTS Tyrosine kinase catalytic domain signature 262 284 IPR001245 GO:0004672|GO:0006468
Cmo07g00331 378 PRINTS Tyrosine kinase catalytic domain signature 197 215 IPR001245 GO:0004672|GO:0006468
Cmo07g00331 378 PRINTS Tyrosine kinase catalytic domain signature 159 172 IPR001245 GO:0004672|GO:0006468
Cmo07g00331 378 PRINTS Tyrosine kinase catalytic domain signature 306 328 IPR001245 GO:0004672|GO:0006468
Cmo07g00331 378 Gene3D Transferase(Phosphotransferase) domain 1 164 363 - -
Cmo07g00331 378 MobiDBLite consensus disorder prediction 1 22 - -
Cmo07g00331 378 SMART serkin_6 81 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo07g00331 378 CDD STKc_MAP3K-like 88 335 - -
Cmo07g00331 378 SUPERFAMILY Protein kinase-like (PK-like) 55 335 IPR011009 -
Cmo07g00331 378 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 18 366 - -
Cmo07g00331 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Cmo07g00331 378 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 18 366 - -
Cmo07g00331 378 ProSiteProfiles Protein kinase domain profile. 81 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo07g00331 378 Pfam Protein tyrosine and serine/threonine kinase 83 335 IPR001245 GO:0004672|GO:0006468
Cmo07g00331 378 Gene3D Phosphorylase Kinase; domain 1 70 163 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g01262 Cmo-Chr3:9665644 Cmo07g00331 Cmo-Chr7:1551809 3.01E-113 dispersed
Cmo05g00777 Cmo-Chr5:4440030 Cmo07g00331 Cmo-Chr7:1551809 8.38E-99 dispersed
Cmo07g00331 Cmo-Chr7:1551809 Cmo18g00125 Cmo-Chr18:888021 3.78E-140 dispersed
Cmo03g00591 Cmo-Chr3:5670918 Cmo07g00331 Cmo-Chr7:1551809 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74453 PF07714 PK_Tyr_Ser-Thr 1.10E-66 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g00331 - - cmo:103484647 675.626