Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo07g00355 | ATGGCCTCAATTGCTGGTCCCAAAGCTTCCTCAAATCCGCCACAAAAAACAGCCAATGGTGCAATGGCTAATGGGAAACAAACATCAACTGAAGTAGATTCCCCTCACAATGAAGCTAGAAGCTCAGTAGATCAAGAGAAGAAAACATCAGAATATGGAAGTGTAAAGAGCAGTATATGTAGAGGGAGCACGAGCAGTGATATAAGTGAGGAGAGCTCTTGCAGTAGTTTTAGTAGTAGTATCAGTAAACCTCATAAAGCAAATGATTTGAAATGGGAGGCCATTCAAGTTGTTCGTGCCAAAGATGGGGCGATGGGATTAAGCCATTTTAGACTTTTGAAGAAGTTGGGTTGTGGGGATATTGGGAGTGTCTATCTCTCTGAGTTAAGAGGAACAAAATGTCATTTTGCAATGAAGGTTATGGATAAAAATACTTTAGCCAGTCGTAAAAAATCGCTTCGGGCGCAAACCGAAAGAGAAATACTTCAATCCCTTGATCACCCTTTCCTTCCAACATTATACACTCACTTTGAGACAGAGAAATTCTCATGCTTGGTGATGGAGTTCTGCCCTGGAGGAGACTTGCACACTCTTAGACAGAGGCAACCAGGGAAGCATTTTCCTGAGCATGCAGTGAAATTCTATGTAGCAGAGGTTCTTCTTGCACTGGAATATCTGCACATGCTTGGGATTGTGTACCGTGATCTTAAGCCAGAGAATATTCTCGTGAGGGAAGATGGACACATAATGCTTTCAGATTTTGATCTATCTCTCCGTTGTGCTGTTAGTCCAACTCTTGTTAAAAATCTCTCTGCAGAGTCTGAGGCTTTAAGAAAGAACACAGGCTACTGCGTGCAGCCTGCTTGCATTGAGCCATCCTGCATCCAACCATCTTGTGTGGTTCCTACGACCTGCTTCGCACCTCACCTCTTTTCTAGTAAGTCGAAGAAGGATCGGAAGCCGAAAATTGAAGTGGGGAATCAGGTCAGTCCATTGCCAGAGCTCATTGCAGAGCCAACTGATGCTCGATCCATGTCTTTCGTTGGTACTCATGAGTACTTGGCACCTGAGATCATCAAGGGTGAAGGGCATGGAAGTGCTGTGGATTGGTGGACTTTTGGTATTTTTCTATATGAGCTACTATTTGGTAAAACTCCTTTTAAGGGGTCTGGAAATCGAGCTACGTTGTTCAACATTGTCGGTCAGCCACTTCGGTTTCCTGATGCACCAGTTGTGAGTTTTGCTGCAAAGGATCTCATAAGAGGATTGCTAGTGAAGAAACCAGAACAAAGATTGGGTAATGAACGTGGAGCAACTGAGATCAAGCAGCATCCTTTTTTTGAAGGTGTGAACTGGGCATTAATACGTTGTGCTACTCCTCCTGAAATCCCAAAGCCGGTTGAGATTGAGAGAATACCACACGCACACGCAGTGGCATCGACCAGTTTAAAGGCCGTTGCTATTGCAGCTGCTGCAGCAGATAAAAAAGCATCCGATAACTATCTCGAGTTCGATTTCTTTTAG | 1524 | 44.03 | MASIAGPKASSNPPQKTANGAMANGKQTSTEVDSPHNEARSSVDQEKKTSEYGSVKSSICRGSTSSDISEESSCSSFSSSISKPHKANDLKWEAIQVVRAKDGAMGLSHFRLLKKLGCGDIGSVYLSELRGTKCHFAMKVMDKNTLASRKKSLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQRQPGKHFPEHAVKFYVAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCAVSPTLVKNLSAESEALRKNTGYCVQPACIEPSCIQPSCVVPTTCFAPHLFSSKSKKDRKPKIEVGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNIVGQPLRFPDAPVVSFAAKDLIRGLLVKKPEQRLGNERGATEIKQHPFFEGVNWALIRCATPPEIPKPVEIERIPHAHAVASTSLKAVAIAAAAADKKASDNYLEFDFF | 507 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 1640794 | 1643872 | - | CmoCh07G003550.1 | Cmo07g00355 | 385663 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo07g00355 | 507 | MobiDBLite | consensus disorder prediction | 52 | 83 | - | - | |
Cmo07g00355 | 507 | SUPERFAMILY | Protein kinase-like (PK-like) | 87 | 473 | IPR011009 | - | |
Cmo07g00355 | 507 | PANTHER | FLIPPASE KINASE 1-RELATED | 54 | 507 | - | - | |
Cmo07g00355 | 507 | Gene3D | Transferase(Phosphotransferase) domain 1 | 341 | 465 | - | - | |
Cmo07g00355 | 507 | MobiDBLite | consensus disorder prediction | 1 | 83 | - | - | |
Cmo07g00355 | 507 | Gene3D | Transferase(Phosphotransferase) domain 1 | 194 | 261 | - | - | |
Cmo07g00355 | 507 | Pfam | Protein kinase domain | 344 | 447 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo07g00355 | 507 | Pfam | Protein kinase domain | 111 | 261 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo07g00355 | 507 | SMART | serkin_6 | 110 | 447 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo07g00355 | 507 | MobiDBLite | consensus disorder prediction | 37 | 51 | - | - | |
Cmo07g00355 | 507 | CDD | STKc_phototropin_like | 108 | 470 | - | - | |
Cmo07g00355 | 507 | Gene3D | Phosphorylase Kinase; domain 1 | 108 | 193 | - | - | |
Cmo07g00355 | 507 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Cmo07g00355 | 507 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 231 | 243 | IPR008271 | GO:0004672|GO:0006468 | |
Cmo07g00355 | 507 | ProSiteProfiles | Protein kinase domain profile. | 110 | 447 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo07g00355 | 507 | PANTHER | SERINE/THREONINE KINASE FAMILY PROTEIN | 54 | 507 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo07g00355 | Cmo-Chr7:1640794 | Cmo18g00610 | Cmo-Chr18:7402842 | 0 | dispersed | |
Cmo12g01248 | Cmo-Chr12:11070285 | Cmo07g00355 | Cmo-Chr7:1640794 | 1.63E-153 | dispersed | |
Cmo03g00624 | Cmo-Chr3:5785792 | Cmo07g00355 | Cmo-Chr7:1640794 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74454 | PF00069 | Pkinase | 1.70E-38 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo07g00355 | K08286 | - | csv:101209748 | 849.736 |