Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo07g00368 | ATGTTTCAACAACAAAGAGCTCATAACTCGAGCTTGATGGAACCCACAAATGGAAGTAATGGTAACAGCAACAACTCGAATTCGGCCTCAAAGCAGAGACTACGATGGACAAACGACCTTCACGAAGGATTTGTCAATGCAGTGGTACAACTTGGAGGCCCAGATCGTGCTACACCAAAAGGTGTCCTTAGAGTAATGGGTGTTCAAGGTTTAACAATATACCATGTCAAAAGCCACCTGCAGAAATATCGACTCGCAAAATACGTTCCTGACTCCTCATCTACTGAAGTGCACAAGTGGTTCACTCTTTTTGTTGTATTGTTGATGCAAGGGAAAAAGGCTGACAAGAAGGATTCTGGTGACATTCTATCAAATATTGATGGCTCATCGGGAATGCAAATCACTGAAGCACTTAAGCTGCAGATGGAGGTCCAGAAGCGGCTGCATGAACAATTAGAGGTCCAGAGACAGCTACAGTTACGGATTGAAGCTCAAGGCAAGTACCTAAAGAAGATAATTGAAGAGCAACAAAAACTTAGTGGGGTTCTTTCAGCAGCTCCAGTTGCTTCTCCCTTATCAGCTTCTGTTTCTGGTGACAACTGCCCAGAAACTGATAAAAACGACCCGTCAACACCTGTGCCCACATCTGAGTCTCCTCGCCAAGAGAAAGCATCAAAGGAATCTGCCCAAGCCAAGAGTATCTCTATTGATGATTCTTTCCCGTCTCATCACGAACCATTGACACCAGATTCCGGTTGCCATGGCTCCCTAGATGACAGCCCAAGGCCAGTGAAGAAGCCAAGGCAGTACAGGGATGGTGCATGTGCCAAATCAGAGATGATGCTTGCACATCAAATACTAAAGTCAAGTCTAAACTCCACTCCCAAGGAATCACGCCCCATTTCTCTAGCCAGGGAAACGATCGATCCTTTGTCTGGAATGTCAATTGGTGATGATGATCGGTTGGACTAA | 972 | 45.37 | MFQQQRAHNSSLMEPTNGSNGNSNNSNSASKQRLRWTNDLHEGFVNAVVQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYVPDSSSTEVHKWFTLFVVLLMQGKKADKKDSGDILSNIDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSAAPVASPLSASVSGDNCPETDKNDPSTPVPTSESPRQEKASKESAQAKSISIDDSFPSHHEPLTPDSGCHGSLDDSPRPVKKPRQYRDGACAKSEMMLAHQILKSSLNSTPKESRPISLARETIDPLSGMSIGDDDRLD | 323 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 1680538 | 1683042 | + | CmoCh07G003680.1 | Cmo07g00368 | 385676 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo07g00368 | 323 | Pfam | MYB-CC type transfactor, LHEQLE motif | 132 | 178 | IPR025756 | - | |
Cmo07g00368 | 323 | SUPERFAMILY | Homeodomain-like | 30 | 85 | IPR009057 | - | |
Cmo07g00368 | 323 | MobiDBLite | consensus disorder prediction | 191 | 272 | - | - | |
Cmo07g00368 | 323 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 28 | 88 | IPR017930 | - | |
Cmo07g00368 | 323 | Pfam | Myb-like DNA-binding domain | 34 | 84 | IPR001005 | - | |
Cmo07g00368 | 323 | Coils | Coil | 135 | 155 | - | - | |
Cmo07g00368 | 323 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL7 | 7 | 320 | - | - | |
Cmo07g00368 | 323 | MobiDBLite | consensus disorder prediction | 191 | 219 | - | - | |
Cmo07g00368 | 323 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Cmo07g00368 | 323 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 31 | 86 | IPR006447 | GO:0003677 | |
Cmo07g00368 | 323 | MobiDBLite | consensus disorder prediction | 289 | 323 | - | - | |
Cmo07g00368 | 323 | Gene3D | - | 30 | 89 | - | - | |
Cmo07g00368 | 323 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE | 7 | 320 | IPR044848 | GO:0003700 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo06g00056 | Cmo-Chr6:349595 | Cmo07g00368 | Cmo-Chr7:1680538 | 4.83E-61 | dispersed | |
Cmo07g00368 | Cmo-Chr7:1680538 | Cmo14g00469 | Cmo-Chr14:2300274 | 1.84E-58 | dispersed | |
Cmo03g00639 | Cmo-Chr3:5852404 | Cmo07g00368 | Cmo-Chr7:1680538 | 5.89E-172 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
10097 | PF00249 | Myb_DNA-binding | 2.00E-05 | CL0123 | Cmo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo07g00368 | - | - | cmax:111478721 | 452.595 |