Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g00492 ATGGCGAATATGTGTGCCGACAGTGGCAATCTTATGGCGATTGCTCAGCAAGTTATGAAGCAGAAGCAGCAACAGGAGCAGCAACAGCAGCAGCCTCCACAACAGCCGCCGCAGCAGCAGCTCACTAGCCCTTCCACTTTTACTCTGAACCCATGGAGTGGCTCGAACCATGGTCTATCCAGTCCAGATTTGGGGTTTGGGCTTGCCGGAGCTGGATTTTCCGATCCGTTTCAGGTGCAGAGAGTGGTCGACGGTGGAGAAACGAGCTTTCAGTTTCCGAACTTAGAGCACCATTCTTCTTCTTTCAGATATCCCGATTTCGACGGCGGCGCTGCTGCAGATTTCGACTCCGATGAGTGGATGGAGAGTCTAATGGCTGGTGGAGATTCAACGGATAGCTCTAATCTCCCTTCTGGTTGCGACGCGTGGCACGCTAATTCGGATATTGCTCTCTACGGTGATGATCCCTTTGTCCCCTGTCCCAGTCGCCTCACCATCCCCTGTTCTTCACCCTCCGATCTCAACAGAGTCATTTTCCCGGAACCTCCGAAAAATCAAGCCGCCATTCTACCGCCTGTGGTTTCATGGACCGGGCTTACTCCCAAGACTCCACCGGTGGTGGTTAAGGACACTAACGGCTGTTCGTCGAGTTCTGCAGAGAACGAACCGAAACCGCCACTTCTGAAAACCCTAATTGAATGTGCTAGACTTTCTGAATCGGAACCAAATCGGGCGGCGCAAATATTTATCCAGCTTAAGGAATCGTCATCGGAGCATGGAGATCCGACGGAGAGAGTCGCTTTTTACTTCCTCGAAGCTCTGTACCGGAGATTATCACTTCAAACGGAGAATCGTTTGGTTTGTTTGGAATCCACTTCAGATGATTTCACCATTTCTTACAAAGCTCTCAACGACGCCTGCCCGTACTCTAAATTCGCCCATTTGACTGCGAATCAAGCGATACTCGAAATGACAGAGAACGCGAGCAAGATTCACATAATCGACTTTGGAATTTCTCAGGGAGTTCAATGGGCGGCGCTTCTTCAAGCTCTCGCAACCCGCTCCTCCGGAAAACCAACCGGAATCCGGATCTCCGGCATTCCAGCTCCGATGCTCGGAAACTGCCCAGCCACAGCGCTGTTCGCGACGGGTAATCGACTGGCCGAGTTCGCCAAGCTTCTAGAACTGAACTTCGAATTTGACCGAATCCTCACCCCAATCGAAGAACTGAAAGAATCCTCGTTCCGAATCGACTCCGACGAAACCCTCGCCGTGAATTTCATGCTTCAACTTTACAATCTCCTCGACGAAACTCCTCGCGTCGTTCTGAACGTTTTGCGACTCGCTAAATCACTGAACCCTAAAATCGTAACCCTAGGCGAATACGAAGCCAGCCTGAATCGGGTCGGGTTCTTTAACCGGTTCAAGAACGCACTCCGATACTACTCAGCCGTGTTCGAATCACTGGACCCAAAATTACCTCGCAACTCAAACGAAAGGCTGCAACTGGAAAAGCTCGTACTGGGGCGGCAGATCGGCGACATTGTCGGACCAGAGTCGTCGCCGGGAGCCAAAATCGAACGGATGGAAGACAAAGAACAGTGGAAAATGATGATGGAAAATTGCGGGTTTGAAGCGGTAAATCTCAGCCATTACGCGAAAAGTCAAGCTCAAATCCTTTTATGGAAGTATGATTACAGCTGTGAGTATTCTTTGATCGAATCCTCGCCTGGATTTCTCTCGTTGGCCTGGAATCAAGTCCCGATCATTACAGTTTCTTCCTGGCGTTGA 1791 50.59 MANMCADSGNLMAIAQQVMKQKQQQEQQQQQPPQQPPQQQLTSPSTFTLNPWSGSNHGLSSPDLGFGLAGAGFSDPFQVQRVVDGGETSFQFPNLEHHSSSFRYPDFDGGAAADFDSDEWMESLMAGGDSTDSSNLPSGCDAWHANSDIALYGDDPFVPCPSRLTIPCSSPSDLNRVIFPEPPKNQAAILPPVVSWTGLTPKTPPVVVKDTNGCSSSSAENEPKPPLLKTLIECARLSESEPNRAAQIFIQLKESSSEHGDPTERVAFYFLEALYRRLSLQTENRLVCLESTSDDFTISYKALNDACPYSKFAHLTANQAILEMTENASKIHIIDFGISQGVQWAALLQALATRSSGKPTGIRISGIPAPMLGNCPATALFATGNRLAEFAKLLELNFEFDRILTPIEELKESSFRIDSDETLAVNFMLQLYNLLDETPRVVLNVLRLAKSLNPKIVTLGEYEASLNRVGFFNRFKNALRYYSAVFESLDPKLPRNSNERLQLEKLVLGRQIGDIVGPESSPGAKIERMEDKEQWKMMMENCGFEAVNLSHYAKSQAQILLWKYDYSCEYSLIESSPGFLSLAWNQVPIITVSSWR 596
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2224850 2227516 - CmoCh07G004920.1 Cmo07g00492 385800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g00492 596 ProSiteProfiles GRAS family profile. 218 596 IPR005202 -
Cmo07g00492 596 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 228 595 IPR005202 -
Cmo07g00492 596 PANTHER SCARECROW-LIKE PROTEIN 4-RELATED 228 595 - -
Cmo07g00492 596 MobiDBLite consensus disorder prediction 16 61 - -
Cmo07g00492 596 Pfam GRAS domain family 228 596 IPR005202 -
Cmo07g00492 596 MobiDBLite consensus disorder prediction 16 60 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo07g00492 Cmo16g00713 CCT
Cmo04g00840 Cmo07g00492 CCT
Cmo03g00782 Cmo07g00492 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00840 Cmo-Chr4:4192956 Cmo07g00492 Cmo-Chr7:2224850 0 dispersed
Cmo07g00492 Cmo-Chr7:2224850 Cmo16g00713 Cmo-Chr16:3569005 0 dispersed
Cmo03g00782 Cmo-Chr3:6454476 Cmo07g00492 Cmo-Chr7:2224850 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
10108 PF03514 GRAS 2.80E-111 CL0063 Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g00492 - - csv:101218550 966.066