Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g00504 ATGCTGCCCATTTCTTTCAATAATGCCATATTTATGCATCATCGCCTTTGGAGTATTTTAATTAGTCAATCATTATTGCTTTCCATCACTGTCTGCATGCATAGTGTTATAGTTTGTCCTAAACTGATCAACGGACCAAGAGTGCTGAGACTCACAATGCTGAAGTGCTTATTGGTCATAGCTTCCTTGGTCCTCTCCTCCGCTTTTGCACAGAAACAGAGCCCTCCAAAAGATCCAGATGAGGAATGGCACACGTTGACAGGGGAAGAGCCTATAGTGGTAGCAAGGGGTGGGTTTTCTGGAGTGTTTCCTGAATCGAGCGCGCTTGCAAATGAATTAGCAGTGTCTAATGGTTTACCCAACACTGTTTTGTACTGCAACCTCCAACTAACCAAAGATGGGCTTGCTATTTGCTTATCTGATATTCTGCTTGAAAACTCAACCAACATTGAACAAGTCTTCCCTAAATCTCGTAAGACTTACGAAATCAATGGAAAGGTTTACAAAGGATGGTTTTCTGTTGATTTCATGTCTGATATTCTCTTTACCAAAGTCGCCTTGGTTCAAGGTATCATGTCCCGCCCTAGTGTGTATGATGGTGTTTGGCCAATTTCTGCTGTTGACGATGTCTTAGGACTGAAACGACCTGTTTGGTTGAACGCTGAGTGGGAAACATTCTACCAAGAACACAATCTGAGTATCATATCATTCGTTAAGAAGGCATTGAGACTGATGCCCATAGACTTTGTGTCATCTTCCGAAATTGGAATAGTGAAAGGGCTAGGTGGGGCTGTGAACAGCGCCAAAACAAAGCTCATCTTTCGGTTCTTAGGAGCCACTGAAACAGAGCCAACAACAGGAAAACAATACGGTGACTTGCTTCATGAGCTGGCCATGATAAAGACGATTGCCTCGGGAATTGCGGTCCCAAAATCATACATTTGGCCAGTTAGTCGTGAAGAGTATGTGCTGCCTGCAACAACTGTTGTGATGGATGCCCACAATCTTGGCTTGGAAGTCTATGCTCATGGCTTTGCAAACGATGCCGTTGTTGGTTACAATTATAGTTATGATCCTGTCCGTGAGTACATTCCGTTTATTGATAATGGCAAATTTGCTGTTGATGGTTTGATTACCGATTACATTCCTACTGCTTCTGAAGCCATTGCCTGCTATGTCAGTTTTCGCAACCCCGCGAAATCTAAACGTGTCAGACGAGAACCGTTGGTGATAAGCAGCAATGGGGCAAGTGGGGATTACCCAGGGTCAACAGACCTTGCATACGAAGCAGCAATTGAGGATGGGAGTGACGTAATTGATTGTTCAGTACAAATATCAAAAGATGGAGTTCCTTTCTGCATGGAAGCCAGTGATCTTTTGCCAACTACCACTGCTATCACTGCTTTCAATGATAAAACTACGGCTGTTCCAGAACTTCAACAAGATCCTGGAATCTTCTCTTTTGATCTTACTTGGCCTCAGATTCTAACATTGAAACCTCAAATCACTAACCCTTTCCTGAGCTCTTCTGGGCTTGTCCGAAATCCTGCCTTTAAGAACAAGGGCAAATTCATGTCCCTCTCTGACTTTCTCGAGTTCGCCAAAGCCAGAGGTGTTCGTGGGATCATGATCAACCTCCAAAATGCGGCCTTCTTGGCTGCAAAGAAAGGTCTTGACATGGTGGGAATCGTATCGACGACAATGAGCGACGCGCATATGGAGAAGGAATCAACACTAAAAGTTTATATAAGGTCGGATGACACTTCTGTGTTGACCGCTTTCAAAACCAATTTCCCAACTTTCATAAGAGTTTTAACTGTTGATGGCAAGTATGGGGAAGTCCCCAAAAAGGTCGCTGACGAGATCAAAATCCATGCTGACGCTGTTGCCGTTCCTCGTTCAGCCCTAGTCGAAATCACCAACTATTTTACGGTTAGCAGCACGGATGTGGTTGCTCAATTGAAGTCCGCCAATCTCTCCGTTTTCGTTTATGTCATAAGGAATGAATACGTGTCTTTAGCGTTTGATTACTACTCCCAAGCCTCTCTCGAAGTCTCCACATACGTCGACTTCTTCCACGTTGACGGCGTCATCACTGACTTCCCTTATACTGCAAAACGATATATAACATGTCCGTGTCGGCCAGTTCACACGGATAGCAGTGGATATTCAATCTTACCGCCAGAAGTTGGAACACTCCTTGCTCTGGTGCCGCAAGAGGTACGACCACGTGTGGATCCTCCCTCGCCTCCATTGGATGGAAAAGCTATCGTCGACCCACCGCTACCGCCGGTGAGCAATGTGTCGACCACCGGCCCTTCAGTCCCTGCCACTGCCGACGCTGTACCAAATATTTCTAACTTCTTCCTATCTTTACTCTCAGTTGTGGTGCTCACCTTCCATGCTCACTCTATACTGTAA 2421 45.11 MLPISFNNAIFMHHRLWSILISQSLLLSITVCMHSVIVCPKLINGPRVLRLTMLKCLLVIASLVLSSAFAQKQSPPKDPDEEWHTLTGEEPIVVARGGFSGVFPESSALANELAVSNGLPNTVLYCNLQLTKDGLAICLSDILLENSTNIEQVFPKSRKTYEINGKVYKGWFSVDFMSDILFTKVALVQGIMSRPSVYDGVWPISAVDDVLGLKRPVWLNAEWETFYQEHNLSIISFVKKALRLMPIDFVSSSEIGIVKGLGGAVNSAKTKLIFRFLGATETEPTTGKQYGDLLHELAMIKTIASGIAVPKSYIWPVSREEYVLPATTVVMDAHNLGLEVYAHGFANDAVVGYNYSYDPVREYIPFIDNGKFAVDGLITDYIPTASEAIACYVSFRNPAKSKRVRREPLVISSNGASGDYPGSTDLAYEAAIEDGSDVIDCSVQISKDGVPFCMEASDLLPTTTAITAFNDKTTAVPELQQDPGIFSFDLTWPQILTLKPQITNPFLSSSGLVRNPAFKNKGKFMSLSDFLEFAKARGVRGIMINLQNAAFLAAKKGLDMVGIVSTTMSDAHMEKESTLKVYIRSDDTSVLTAFKTNFPTFIRVLTVDGKYGEVPKKVADEIKIHADAVAVPRSALVEITNYFTVSSTDVVAQLKSANLSVFVYVIRNEYVSLAFDYYSQASLEVSTYVDFFHVDGVITDFPYTAKRYITCPCRPVHTDSSGYSILPPEVGTLLALVPQEVRPRVDPPSPPLDGKAIVDPPLPPVSNVSTTGPSVPATADAVPNISNFFLSLLSVVVLTFHAHSIL 806
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2290184 2294791 + CmoCh07G005040.1 Cmo07g00504 385812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g00504 806 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 53 800 - -
Cmo07g00504 806 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL6-RELATED 53 800 - -
Cmo07g00504 806 SUPERFAMILY PLC-like phosphodiesterases 91 388 IPR017946 GO:0006629|GO:0008081
Cmo07g00504 806 ProSiteProfiles GP-PDE domain profile. 408 709 IPR030395 GO:0006629|GO:0008081
Cmo07g00504 806 Gene3D Phosphatidylinositol (PI) phosphodiesterase 89 389 IPR017946 GO:0006629|GO:0008081
Cmo07g00504 806 Gene3D Phosphatidylinositol (PI) phosphodiesterase 406 710 IPR017946 GO:0006629|GO:0008081
Cmo07g00504 806 Pfam Glycerophosphoryl diester phosphodiesterase family 414 702 IPR030395 GO:0006629|GO:0008081
Cmo07g00504 806 SUPERFAMILY PLC-like phosphodiesterases 408 709 IPR017946 GO:0006629|GO:0008081
Cmo07g00504 806 ProSiteProfiles GP-PDE domain profile. 91 389 IPR030395 GO:0006629|GO:0008081
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g00504 Cmo-Chr7:2290184 Cmo09g00981 Cmo-Chr9:5199176 0 dispersed
Cmo03g00804 Cmo-Chr3:6521474 Cmo07g00504 Cmo-Chr7:2290184 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g00504 - - csv:101216172 996.497