Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g00534 ATGTCGGACTATGCCACTAGTTCCTTGGTCGATATGGGAAAACCCAATAACGCCGCCGCCGCCCCCACTGCCACCGCCACGCTCGACACCCTATCCTCCGCCCCCTCCCCGGACAACTCCGTCAAGAACGATAAGAAAAAAAGGTCCATTATCCCAAAGATTTTCAGCTCAAAGAGAACCGACAAGTTAAACACAGACGATGATTTGTTTCAATTAGAGTACGGCGACGGCGCTGTTGATATTGGGAAGGGAATTGCAATCAGAAGAAAAGCTTTCTTGGAGTCATCCCCCACCATAAAAAAGAGCTTCTCAGAAAGAAAGGCAAGTTCAGAAATCCAAGGCTTGAATCTTTCAAACTTTGATCAATCTGTGACTCTACCAAATGAAACCAAGAATTTTCGGATTTTTGTAGCGACGTGGAATGTTGGTGGGAAAACTCCGAACAATAGCATCAACCTTGAAGAGTTCTTACAAGTGGAAGACACGACAGACATTTATGTAATTGGGTTTCAGGAAATTGTTCCTCTGAATGCCGGAAACGTACTTGTTATAGAAGACAATGAACCTGCAGCGAAGTGGCTTGGTCTAATAAGCCAAACCATAAACAAAACCAAGAACAATGACTCCATTAATGGTGGCTCTGATAATTCATCTCATGGCTCAAAAGCTTCAAAGGATTCAAAGTCTCTGCCTTTCTTCCAAAAGCCATCGTTAAAGATGCTGAGCAGGAACCTGAGGCCGATTGATGGTCGGCTGCTGAAGGCCTGCAACTGCCCAATTGAATTGGGATCGAAAGAGAGGAGATTAAGGAAGCTCAACGACGACCCGACAGCTGATTTTGACTCCATGATCTCACCGGAGCTTCATAATGAACATGGAAGCTTAATGATGGATCGATTCATTTCAATTTCAGAACTTGCTTCAGCAAAAACAGGGGATGATGATATGCGCTACAAGCTCATATCCAGCAAGCAAATGGTGGGTTTGTTCTTGTCGGTTTGGGCTCGACAGGAGCTCATCCCTCATATTGGTCATCTTAGAGTCTCCACCGTTGGAAGAGGCATAATGGGTCGCCTCGGAAACAAGGGATGCATATCGATTAGCATGTCAGTGCATGAGACAAGCTTTTGCTTCGTTTGCAGTCATTTGGCATCGGGAGAGAAGGAAGGGGATGAACTGAGAAGAAACGCCGATGCAGCTGAGATACTCAAAAGCACGCAGTTCAACAAGATCTGTAAGAAGCCCAATAAACGAGCCCCTGAGAAAATAATGGATCATGACCGGATAATCTGGCTGGGAGACTTGAACTACCGGTTGTCATTGAGCTACGAGGAAACCAGGATTTTAGTAGAGGATAGTGATTGGGACAAACTCCTAGAACGGGATCAGTTGAACGTTGAGAGAGAAGCGGGAAGAGTTTTCAGTGGGTTCAGTGAGGGGCGGATCCATTTTGCACCGACATACAAGTACACCCAGAACTCAGATTCGTACGCCGGGGAGAGCGTGAAATCGAAGAGGAAGCGGCGGACGCCGGCATGGTGCGACAGAATACTGTGGCGAGGGAATGGGATGGAGCAGGTGTGTTACATTCGAGGGGAGTTGAGATTTTCGGATCACAGGCCAGTATGTGGAGTGTTTAGGGTGGCGGTGGAGTTGAGGAACAGAAGCAGTAAGTTCAGGAAAGGGTACTCATGTGCGGCGCCAAGGCTGCTGCAATTTGAGGAGTGTGTGATACCCAAAAGGCATAGCTTCTATGAATTCTAA 1764 46.83 MSDYATSSLVDMGKPNNAAAAPTATATLDTLSSAPSPDNSVKNDKKKRSIIPKIFSSKRTDKLNTDDDLFQLEYGDGAVDIGKGIAIRRKAFLESSPTIKKSFSERKASSEIQGLNLSNFDQSVTLPNETKNFRIFVATWNVGGKTPNNSINLEEFLQVEDTTDIYVIGFQEIVPLNAGNVLVIEDNEPAAKWLGLISQTINKTKNNDSINGGSDNSSHGSKASKDSKSLPFFQKPSLKMLSRNLRPIDGRLLKACNCPIELGSKERRLRKLNDDPTADFDSMISPELHNEHGSLMMDRFISISELASAKTGDDDMRYKLISSKQMVGLFLSVWARQELIPHIGHLRVSTVGRGIMGRLGNKGCISISMSVHETSFCFVCSHLASGEKEGDELRRNADAAEILKSTQFNKICKKPNKRAPEKIMDHDRIIWLGDLNYRLSLSYEETRILVEDSDWDKLLERDQLNVEREAGRVFSGFSEGRIHFAPTYKYTQNSDSYAGESVKSKRKRRTPAWCDRILWRGNGMEQVCYIRGELRFSDHRPVCGVFRVAVELRNRSSKFRKGYSCAAPRLLQFEECVIPKRHSFYEF 587
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2416984 2419895 + CmoCh07G005340.1 Cmo07g00534 385842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g00534 587 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 5 37 585 - -
Cmo07g00534 587 SUPERFAMILY DNase I-like 117 552 IPR036691 -
Cmo07g00534 587 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 37 585 IPR045849 GO:0004445|GO:0046855
Cmo07g00534 587 SMART i5p_5 267 554 IPR000300 GO:0016791|GO:0046856
Cmo07g00534 587 MobiDBLite consensus disorder prediction 1 22 - -
Cmo07g00534 587 Gene3D Endonuclease/exonuclease/phosphatase 273 567 IPR036691 -
Cmo07g00534 587 Gene3D Endonuclease/exonuclease/phosphatase 118 225 IPR036691 -
Cmo07g00534 587 Pfam Endonuclease/Exonuclease/phosphatase family 138 539 IPR005135 GO:0003824
Cmo07g00534 587 MobiDBLite consensus disorder prediction 205 230 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g00987 Cmo07g00534 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01835 Cmo-Chr2:10403512 Cmo07g00534 Cmo-Chr7:2416984 2.21E-143 dispersed
Cmo04g02609 Cmo-Chr4:19015340 Cmo07g00534 Cmo-Chr7:2416984 9.58E-174 dispersed
Cmo07g00534 Cmo-Chr7:2416984 Cmo15g00554 Cmo-Chr15:2653076 2.69E-174 dispersed
Cmo08g00327 Cmo-Chr8:2040245 Cmo07g00534 Cmo-Chr7:2416984 9.87E-87 dispersed
Cmo15g00919 Cmo-Chr15:4665102 Cmo07g00534 Cmo-Chr7:2416984 6.36E-30 transposed
Cmo03g00834 Cmo-Chr3:6654017 Cmo07g00534 Cmo-Chr7:2416984 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g00534 - - cmax:111497454 1116.68