Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g00571 ATGGCGGATAGCTTTTACTGTACAGAGAGTGTCAATGCTTGCTTTGATGAGCTTGAATGTAATGCCACAAACAATGAGTTTGAGCGAATCGAGTGTTTTGGATCCGGGAATTCGATGGTCTCTGCGATACAGAGTGAACAGAGGATAAGAGAAATGGTTGAGAAACAGATTCAGCATTTGCCTAGACATGATTATCTTAAGAGATTGCGCTGTGGGGCATTGGATTCCAAGTTTAGGAGAGACGCTATTGATTGGATTTCGAAGGCTCATGCCCATTACAGCTTTGGAGCTTTGAGTCTATGTCTATCTATGAACTACTTGGATCGTTTCCTCTCAGAATATCACATGCCTATGGATAAAAGCTGGAGTGTGCAGCTGCTGTCAGTAGCTTGTATGTCTCTGGCAGCCAAGATGGAGGAGACAGAAGTTCCTCTTCCCATAGATTTACAGGTTGAGGAGCCCAAGTTCGTGTTCGAACCAAAAACCATTCAAAGAATGGAGCTTCTGGTTCTAAGTAGGTTGAAATGGAAGATGCAAGCCATTACTCCATTTTCTTTCATTGATTATTTCCTCACTAACATCACTGTTGAGCCGCACGAACCGAGGCTATCCTTATTCAAATCTTCACAGCTCATTCTGAGCACAATTAAAGGCATTGACTTCTTGGAATTCAAACCCTCTGAAATTGCTTTGGCTGTGGCTATGTCTGTTTCTGGAGTAGTTCAAGCAGCAGACATCAATAAAGCAATCCTTGCTTTTCCATACATGGAGAAAGAGAGAGTAATGAAGTGTATTGAGCTGATAAGAGATTTTCCATTGATTGGTGGTTCGGTTCCTCAGAGCCCTGTTGGAGTGTTGGATGCAGCTTGTTTGAGTTACAAAACAGAGGAATTAGCAGCAGGGTCGTGCGGTAATTCTTCTTCTTCTTCTCATGACAGTCCAGACAGCAAGAGAAGGAGACTAGACAGAGACCATGAAAGAACACACAAAACAGAGTGA 999 42.84 MADSFYCTESVNACFDELECNATNNEFERIECFGSGNSMVSAIQSEQRIREMVEKQIQHLPRHDYLKRLRCGALDSKFRRDAIDWISKAHAHYSFGALSLCLSMNYLDRFLSEYHMPMDKSWSVQLLSVACMSLAAKMEETEVPLPIDLQVEEPKFVFEPKTIQRMELLVLSRLKWKMQAITPFSFIDYFLTNITVEPHEPRLSLFKSSQLILSTIKGIDFLEFKPSEIALAVAMSVSGVVQAADINKAILAFPYMEKERVMKCIELIRDFPLIGGSVPQSPVGVLDAACLSYKTEELAAGSCGNSSSSSHDSPDSKRRRLDRDHERTHKTE 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2567021 2568456 - CmoCh07G005710.1 Cmo07g00571 385879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g00571 332 MobiDBLite consensus disorder prediction 312 332 - -
Cmo07g00571 332 SMART Cyclin_C_2 181 314 IPR004367 -
Cmo07g00571 332 Gene3D - 62 179 - -
Cmo07g00571 332 SUPERFAMILY Cyclin-like 40 178 IPR036915 -
Cmo07g00571 332 ProSitePatterns Cyclins signature. 79 110 IPR006671 -
Cmo07g00571 332 SMART cyclin_7 84 172 IPR013763 -
Cmo07g00571 332 MobiDBLite consensus disorder prediction 300 332 - -
Cmo07g00571 332 Pfam Cyclin, C-terminal domain 181 271 IPR004367 -
Cmo07g00571 332 Gene3D - 51 266 - -
Cmo07g00571 332 Pfam Cyclin, N-terminal domain 50 178 IPR006671 -
Cmo07g00571 332 PANTHER CYCLIN-D4-1-LIKE 42 323 - -
Cmo07g00571 332 PANTHER CYCLINS 42 323 IPR039361 -
Cmo07g00571 332 CDD CYCLIN 79 171 IPR013763 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00470 Cmo-Chr4:2345832 Cmo07g00571 Cmo-Chr7:2567021 4.81E-62 dispersed
Cmo07g00571 Cmo-Chr7:2567021 Cmo16g00330 Cmo-Chr16:1507017 6.16E-62 dispersed
Cmo12g00169 Cmo-Chr12:1117393 Cmo07g00571 Cmo-Chr7:2567021 1.11E-91 wgd
Cmo03g00875 Cmo-Chr3:6824498 Cmo07g00571 Cmo-Chr7:2567021 2.89E-161 wgd
Cmo05g00557 Cmo-Chr5:2692406 Cmo07g00571 Cmo-Chr7:2567021 2.11E-86 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g00571 K18810 - csv:101209378 470.7