Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cmo07g00705	ATGAACCCCAAGCCCTCCGCATTCTCCTCTTTCCTTCCACTTCTATTTTCTGTTCTTCTTTTTTCTCTCTCGGATTTCGCCTCTTTTAGTTTTGCCTTTCAAATTCCGCCGCCGGCGCTTGTCCCACCGGAAGAATTGATGCTGCCGTCTGACGCCGTTTCGCTTCTTTCGTTCAAGTCCAAAGCTGACTTGGATAACAAGCTTCTTTACACTCTCAATGAGCGGTTTGATTACTGTCAATGGCAGGGTGTGAAGTGCGTCCAGGGTCGTGTTGTTCGTTTGGTTCTTCAATCGTTTGGGCTCCGTGGGATATTGACTCCAAACACTGTGTCTAAGCTCGACCAGCTTCGGTTCCTCAGCCTGCATAATAACTCGCTCGAAGGACCCATTCCTGACCTATCCGGACTCTTCAATCTCAAATCTCTGTTCCTTGGCCGAAACTCTTTCGTTGGGTCTTTTCCGCCGTCGATTCTCACTCTTCACCGGCTTCAGACTCTTGATCTTTCCTACAACAACTTCACCGGTCCGCTTCCGGTGAGGCTTTCCTCGTTGGACCGTCTCATTACTCTCCTTCTCGAATGGAATGGTTTCAATGGAACTATTCCGCCCTTAAATCAATCGTATCTTGAAGTCTTCAATGTCACGGGGAACAATCTCACCGGGCGAGTTCCGGTGACTCCCACTCTCTCGCGTTTCAACACGTCGTCATTTTTCTGGAATCCAGATCTCTGTGGCGAGATCGTCAACAAGGCATGTCATTCACCCGCTCCATTCTTTGAAGCTTCCAATGCCACCGCTCCATCTCACCCTTCTGTCCAAAGCGCACAGTCACAGGACGTAGTTCAATCTCCGGTCTCTCATGCTAAGCACAAGGAAACGAGTATGATTTTGGGGCTTTCAGTGGCTGCCGCAGTCTTAGTAGCAGGTCTTTTATGTTTCTTCGTAGCAGCCAGAACCCAAAGAAGACGAACTGTATCAAAGCCAGCAATTGCGCAGTTTGAGCCCGAAATTGGTTATTCCACAGCTTCCGCAATCGACGAGCGAGTCGACAGGAAGGGCGAATTTCAAGCGAAAGTGAAAGAAATTGAAGAAATTCCAAAAGCCCATAAGAGTGGGTGTCTTATATTTTGTGAAGGGGAGGCAGAGTTATTCAGCTTAGAGCAGTTAATGAGGGCTTCGGCCGAGCTACTAGGTAGAGGCACAATGGGAACTACATATAAAGCCGTGCTGTGCAACCAGTTAATCGTAACGGTGAAGCGTCTTGATGCTACTAAGACCGCCATAACGAGCAGCGAAGTGTTCGACCGGCATTTGGAAGCAGTGGGTGCACTACGCCATCCCAATTTAGTACCAGTTAGGGCCTACTTTCAAGCCAGGGGAGAGAGATTAGTGGTTTATGATTACCAACCTAACGGCAGTCTTTACAACCTCATTCACGGTTCACGATCAGCAAGGGCTAAGCCTCTGCACTGGACATCATGCTTGAAGATTGCAGAAGATTTAGCACAAGGCATTGCTTATATACATCAAGCTTCTAAGTTAATCCATGGCAACTTGAAGTCTACTAATGTGCTCCTAGGAGCAGACTTCGAGGCCTGCCTCACAGACTATGGTCTTTCTGTTCTGGCAGAGTCCCCTGAAGATCCAGATTCTTCACGCTACCAGGCACCTGAAGTTCGGAAATCCAGCCGCAACGCTACCCACAAGAGCGATGTATACGCCTTCGGCGTCCTCTTGCTGGAGCTTTTGACAGGAAGACATCCATCAAACCATCCGTTTGTTGAGCCAAGTGATATGCCAGAATGGGTAAGGGCAGTTAGGGAAGATGATGGTGGGGATAGTAGCCAACTTGGAATGCTTACTGAGGTGGCTAGCATGTGTAGTACTACATCCCCTGAACAGAGGCCACCCATGTGGCAAGTTTTGAAAATGATAATGGAGATTAAAGAGAGTGTGATGACAGAGGACAGTGAATCTAGTGGCTTTTAA	1989	48.27	MNPKPSAFSSFLPLLFSVLLFSLSDFASFSFAFQIPPPALVPPEELMLPSDAVSLLSFKSKADLDNKLLYTLNERFDYCQWQGVKCVQGRVVRLVLQSFGLRGILTPNTVSKLDQLRFLSLHNNSLEGPIPDLSGLFNLKSLFLGRNSFVGSFPPSILTLHRLQTLDLSYNNFTGPLPVRLSSLDRLITLLLEWNGFNGTIPPLNQSYLEVFNVTGNNLTGRVPVTPTLSRFNTSSFFWNPDLCGEIVNKACHSPAPFFEASNATAPSHPSVQSAQSQDVVQSPVSHAKHKETSMILGLSVAAAVLVAGLLCFFVAARTQRRRTVSKPAIAQFEPEIGYSTASAIDERVDRKGEFQAKVKEIEEIPKAHKSGCLIFCEGEAELFSLEQLMRASAELLGRGTMGTTYKAVLCNQLIVTVKRLDATKTAITSSEVFDRHLEAVGALRHPNLVPVRAYFQARGERLVVYDYQPNGSLYNLIHGSRSARAKPLHWTSCLKIAEDLAQGIAYIHQASKLIHGNLKSTNVLLGADFEACLTDYGLSVLAESPEDPDSSRYQAPEVRKSSRNATHKSDVYAFGVLLLELLTGRHPSNHPFVEPSDMPEWVRAVREDDGGDSSQLGMLTEVASMCSTTSPEQRPPMWQVLKMIMEIKESVMTEDSESSGF	662

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
7	3176990	3179711	+	CmoCh07G007050.1	Cmo07g00705	386013

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cmo07g00705	662	PANTHER	PROTEIN KINASE, PUTATIVE-RELATED	19	658	-	-
	Cmo07g00705	662	Gene3D	Transferase(Phosphotransferase) domain 1	470	660	-	-
	Cmo07g00705	662	ProSiteProfiles	Protein kinase domain profile.	391	653	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Cmo07g00705	662	SUPERFAMILY	L domain-like	51	245	-	-
	Cmo07g00705	662	Gene3D	Ribonuclease Inhibitor	49	206	IPR032675	-
	Cmo07g00705	662	Gene3D	Phosphorylase Kinase; domain 1	354	468	-	-
	Cmo07g00705	662	Pfam	Protein kinase domain	394	591	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Cmo07g00705	662	Gene3D	Ribonuclease Inhibitor	207	255	IPR032675	-
	Cmo07g00705	662	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1	19	658	-	-
	Cmo07g00705	662	SUPERFAMILY	Protein kinase-like (PK-like)	395	650	IPR011009	-
	Cmo07g00705	662	MobiDBLite	consensus disorder prediction	544	565	-	-
	Cmo07g00705	662	MobiDBLite	consensus disorder prediction	551	565	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	Cmo03g00983	Cmo07g00705	CST

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	Cmo04g00033	Cmo-Chr4:212885	Cmo07g00705	Cmo-Chr7:3176990	1.03E-163	dispersed
	Cmo04g01061	Cmo-Chr4:5308080	Cmo07g00705	Cmo-Chr7:3176990	4.27E-159	dispersed
	Cmo07g00705	Cmo-Chr7:3176990	Cmo18g01016	Cmo-Chr18:10990716	2.43E-118	dispersed
	Cmo03g00983	Cmo-Chr3:7402802	Cmo07g00705	Cmo-Chr7:3176990	0	wgd

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	74467	PF00069	Pkinase	2.20E-30	CL0016	Cmo	PK

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cmo07g00705	-		-	bhj:120074099	1080.86