Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g00711 ATGTCTGATCACAAATCAGGCTCCATGACCGACCAGCTCTCCAACCAGACTTCTATTTTTGGCCTACGCTTGTGGGTTGTACTTGGGGTTTGTGTTGGAGCTGCTTTTGTGCTTTTTCTGTTTCTAATTTCTCTTTGGATTGCCTCCAAACGCTCTCGCAGGAAGATTTCTCACAGACCCACAATTCCAGTCGACTCCAAAGAAATTCAAGAGATCAGAATCGATCATGCCCTCGCTCAAACCCAAGAACACAAGCCAACTAGACCCCATTTTCAGGTCGACCCTCTTCCAGAGCCGGAGATTATCCCTGGAATTGAGCGGCAAGCGTTGCTTTCGTTGCCTCAGGAGGAAGATCGAGTGAATAGAATTCATATTGATATCGGGAAGGATCATAGGATTTCCTATCCTGAGCGACTTGGTCGGTCGTCTTCCTCGCAGGGCAGTGGAGAGGGCCGATGTGGTGGCGATCAGTTGCCTATAGTGGTGCCTGAAGTTTCGCATTTGGGTTGGGGGCATTGGTACACTCTCAGAGAGCTTGAAGCCTCGACTAATGGTTTTTCCCCTGATAACGTAATCGGTGAAGGTGGGTATGGAATTGTTTACCATGGCATATTGGAGGATGGAACTCAGGTTGCTGTTAAGAATTTGCTAAACAATAGAGGACAAGCCGAGAAGGAGTTTAAAGTAGAAGTCGAAGCAATTGGACGAGTCAGACATAAGAACTTAGTTAGATTGCTGGGATACTGTGCTGAAGGTGCTCATAGGATGCTTGTATACGAGTACATAAATAATGGAAACTTGGAACAATGGCTTCATGGGGAAGTAGGATCTTACAGTCCTCTTACCTGGGAGATCAGAATGAATATCATTCTTGGAACTGCTAAAGGGCTAGCTTACCTTCACGAGGGATTGGAACCGAAGGTTGTTCACCGGGATATCAAATCAAGCAATATCTTACTTGATAAGCAATGGAATTCCAAGGTTTCAGATTTTGGGCTTGCAAAGCTACTATGCTCTGATAACAGCTATATTACAACCCGTGTCATGGGAACATTTGGGTATGTAGCGCCAGAATATGCAAGTACGGGCATGCTAAATGAAAGAAGTGATGTGTATGGTTTTGGAATACTTGTTATGGAAATAATCTCAGGAAGGAACCCGGTTGACTATAGTCGTCCTCCAGATGAGGTGAACTTGATCGATTGGCTTAAGAGAATGGTCAGTAACCGGAATCCAGAGGGCGTATTGGATCCAAAGCTCTCTGAAAAGCCTACTTCGAGAGCATTAAAGCGGGCGCTTCTTGTTGCATTACGCTGCGTGGACCCAAATGCTCAGAAACGGCCAAAAATGGGACATATTATTCATATGCTTGAAGCTGAAGAGGCTACGTGTAAAGGGGATCGCAAAGCTGGGAAGGACCCAGAGAACTCACAAGACAATGTGAAGGATGGTTTAAATGAGAGGCAGGCAACAGAATTAGGTGGCAGCAATGTGGATGAACTCAAAGCTGCCCTACACGGTCACAGCAATGTCAATCCCATTATGTACATCATTTTTGCTGTCTATAGTTTCCATTGCAGTCCTTACACCATTGAAGATAAAATCAATTCATGTCTCTGTCGTCAATGCCCCTCGGAAGATGGTACTCAAGCCTAA 1656 45.23 MSDHKSGSMTDQLSNQTSIFGLRLWVVLGVCVGAAFVLFLFLISLWIASKRSRRKISHRPTIPVDSKEIQEIRIDHALAQTQEHKPTRPHFQVDPLPEPEIIPGIERQALLSLPQEEDRVNRIHIDIGKDHRISYPERLGRSSSSQGSGEGRCGGDQLPIVVPEVSHLGWGHWYTLRELEASTNGFSPDNVIGEGGYGIVYHGILEDGTQVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYINNGNLEQWLHGEVGSYSPLTWEIRMNIILGTAKGLAYLHEGLEPKVVHRDIKSSNILLDKQWNSKVSDFGLAKLLCSDNSYITTRVMGTFGYVAPEYASTGMLNERSDVYGFGILVMEIISGRNPVDYSRPPDEVNLIDWLKRMVSNRNPEGVLDPKLSEKPTSRALKRALLVALRCVDPNAQKRPKMGHIIHMLEAEEATCKGDRKAGKDPENSQDNVKDGLNERQATELGGSNVDELKAALHGHSNVNPIMYIIFAVYSFHCSPYTIEDKINSCLCRQCPSEDGTQA 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3210008 3213108 + CmoCh07G007110.1 Cmo07g00711 386019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g00711 551 CDD STKc_IRAK 192 458 - -
Cmo07g00711 551 ProSiteProfiles Protein kinase domain profile. 186 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo07g00711 551 SUPERFAMILY Protein kinase-like (PK-like) 167 458 IPR011009 -
Cmo07g00711 551 PANTHER RECEPTOR-LIKE KINASE PLANT 1 499 - -
Cmo07g00711 551 PANTHER OS01G0323000 PROTEIN 1 499 - -
Cmo07g00711 551 ProSitePatterns Protein kinases ATP-binding region signature. 192 214 IPR017441 GO:0005524
Cmo07g00711 551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 308 320 IPR008271 GO:0004672|GO:0006468
Cmo07g00711 551 Gene3D Phosphorylase Kinase; domain 1 168 261 - -
Cmo07g00711 551 SMART serkin_6 186 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo07g00711 551 Pfam Protein kinase domain 189 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo07g00711 551 Gene3D Transferase(Phosphotransferase) domain 1 262 473 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00987 Cmo-Chr3:7433788 Cmo07g00711 Cmo-Chr7:3210008 0 dispersed
Cmo06g01104 Cmo-Chr6:8497268 Cmo07g00711 Cmo-Chr7:3210008 0 dispersed
Cmo07g00711 Cmo-Chr7:3210008 Cmo14g02120 Cmo-Chr14:15315376 0 dispersed
Cmo05g00173 Cmo-Chr5:747084 Cmo07g00711 Cmo-Chr7:3210008 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74468 PF00069 Pkinase 3.30E-46 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g00711 - - cmax:111497422 974.156