Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo07g00711 | ATGTCTGATCACAAATCAGGCTCCATGACCGACCAGCTCTCCAACCAGACTTCTATTTTTGGCCTACGCTTGTGGGTTGTACTTGGGGTTTGTGTTGGAGCTGCTTTTGTGCTTTTTCTGTTTCTAATTTCTCTTTGGATTGCCTCCAAACGCTCTCGCAGGAAGATTTCTCACAGACCCACAATTCCAGTCGACTCCAAAGAAATTCAAGAGATCAGAATCGATCATGCCCTCGCTCAAACCCAAGAACACAAGCCAACTAGACCCCATTTTCAGGTCGACCCTCTTCCAGAGCCGGAGATTATCCCTGGAATTGAGCGGCAAGCGTTGCTTTCGTTGCCTCAGGAGGAAGATCGAGTGAATAGAATTCATATTGATATCGGGAAGGATCATAGGATTTCCTATCCTGAGCGACTTGGTCGGTCGTCTTCCTCGCAGGGCAGTGGAGAGGGCCGATGTGGTGGCGATCAGTTGCCTATAGTGGTGCCTGAAGTTTCGCATTTGGGTTGGGGGCATTGGTACACTCTCAGAGAGCTTGAAGCCTCGACTAATGGTTTTTCCCCTGATAACGTAATCGGTGAAGGTGGGTATGGAATTGTTTACCATGGCATATTGGAGGATGGAACTCAGGTTGCTGTTAAGAATTTGCTAAACAATAGAGGACAAGCCGAGAAGGAGTTTAAAGTAGAAGTCGAAGCAATTGGACGAGTCAGACATAAGAACTTAGTTAGATTGCTGGGATACTGTGCTGAAGGTGCTCATAGGATGCTTGTATACGAGTACATAAATAATGGAAACTTGGAACAATGGCTTCATGGGGAAGTAGGATCTTACAGTCCTCTTACCTGGGAGATCAGAATGAATATCATTCTTGGAACTGCTAAAGGGCTAGCTTACCTTCACGAGGGATTGGAACCGAAGGTTGTTCACCGGGATATCAAATCAAGCAATATCTTACTTGATAAGCAATGGAATTCCAAGGTTTCAGATTTTGGGCTTGCAAAGCTACTATGCTCTGATAACAGCTATATTACAACCCGTGTCATGGGAACATTTGGGTATGTAGCGCCAGAATATGCAAGTACGGGCATGCTAAATGAAAGAAGTGATGTGTATGGTTTTGGAATACTTGTTATGGAAATAATCTCAGGAAGGAACCCGGTTGACTATAGTCGTCCTCCAGATGAGGTGAACTTGATCGATTGGCTTAAGAGAATGGTCAGTAACCGGAATCCAGAGGGCGTATTGGATCCAAAGCTCTCTGAAAAGCCTACTTCGAGAGCATTAAAGCGGGCGCTTCTTGTTGCATTACGCTGCGTGGACCCAAATGCTCAGAAACGGCCAAAAATGGGACATATTATTCATATGCTTGAAGCTGAAGAGGCTACGTGTAAAGGGGATCGCAAAGCTGGGAAGGACCCAGAGAACTCACAAGACAATGTGAAGGATGGTTTAAATGAGAGGCAGGCAACAGAATTAGGTGGCAGCAATGTGGATGAACTCAAAGCTGCCCTACACGGTCACAGCAATGTCAATCCCATTATGTACATCATTTTTGCTGTCTATAGTTTCCATTGCAGTCCTTACACCATTGAAGATAAAATCAATTCATGTCTCTGTCGTCAATGCCCCTCGGAAGATGGTACTCAAGCCTAA | 1656 | 45.23 | MSDHKSGSMTDQLSNQTSIFGLRLWVVLGVCVGAAFVLFLFLISLWIASKRSRRKISHRPTIPVDSKEIQEIRIDHALAQTQEHKPTRPHFQVDPLPEPEIIPGIERQALLSLPQEEDRVNRIHIDIGKDHRISYPERLGRSSSSQGSGEGRCGGDQLPIVVPEVSHLGWGHWYTLRELEASTNGFSPDNVIGEGGYGIVYHGILEDGTQVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYINNGNLEQWLHGEVGSYSPLTWEIRMNIILGTAKGLAYLHEGLEPKVVHRDIKSSNILLDKQWNSKVSDFGLAKLLCSDNSYITTRVMGTFGYVAPEYASTGMLNERSDVYGFGILVMEIISGRNPVDYSRPPDEVNLIDWLKRMVSNRNPEGVLDPKLSEKPTSRALKRALLVALRCVDPNAQKRPKMGHIIHMLEAEEATCKGDRKAGKDPENSQDNVKDGLNERQATELGGSNVDELKAALHGHSNVNPIMYIIFAVYSFHCSPYTIEDKINSCLCRQCPSEDGTQA | 551 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 3210008 | 3213108 | + | CmoCh07G007110.1 | Cmo07g00711 | 386019 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo07g00711 | 551 | CDD | STKc_IRAK | 192 | 458 | - | - | |
Cmo07g00711 | 551 | ProSiteProfiles | Protein kinase domain profile. | 186 | 458 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo07g00711 | 551 | SUPERFAMILY | Protein kinase-like (PK-like) | 167 | 458 | IPR011009 | - | |
Cmo07g00711 | 551 | PANTHER | RECEPTOR-LIKE KINASE PLANT | 1 | 499 | - | - | |
Cmo07g00711 | 551 | PANTHER | OS01G0323000 PROTEIN | 1 | 499 | - | - | |
Cmo07g00711 | 551 | ProSitePatterns | Protein kinases ATP-binding region signature. | 192 | 214 | IPR017441 | GO:0005524 | |
Cmo07g00711 | 551 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 308 | 320 | IPR008271 | GO:0004672|GO:0006468 | |
Cmo07g00711 | 551 | Gene3D | Phosphorylase Kinase; domain 1 | 168 | 261 | - | - | |
Cmo07g00711 | 551 | SMART | serkin_6 | 186 | 457 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo07g00711 | 551 | Pfam | Protein kinase domain | 189 | 455 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo07g00711 | 551 | Gene3D | Transferase(Phosphotransferase) domain 1 | 262 | 473 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo03g00987 | Cmo-Chr3:7433788 | Cmo07g00711 | Cmo-Chr7:3210008 | 0 | dispersed | |
Cmo06g01104 | Cmo-Chr6:8497268 | Cmo07g00711 | Cmo-Chr7:3210008 | 0 | dispersed | |
Cmo07g00711 | Cmo-Chr7:3210008 | Cmo14g02120 | Cmo-Chr14:15315376 | 0 | dispersed | |
Cmo05g00173 | Cmo-Chr5:747084 | Cmo07g00711 | Cmo-Chr7:3210008 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74468 | PF00069 | Pkinase | 3.30E-46 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo07g00711 | - | - | cmax:111497422 | 974.156 |