Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo07g00746 | ATGGCCGATTTCCAGACCTCGACTCAACGAGCCAAATGGATCTTGAGTCCTCACGAGCTGGTTGGCAGGTACAAAGCTGCTAACCAGAGAGCAATTGAAGCTCTGGAGAAGTTTGGAGCAACACTGATGGTGGTAGATGCTGACGGATCATTGTCCTATCCAGACCCTCTGATAAATTCAAAAGAAAATGCTGACAAACATTCCCGCCCCAAACCTTTGAGTATTGAAGAAGAGCAATTTATGCGAGTATTTTACGAGAACAAACTTCAAGAAGTATGCAACAATTTTCATTTTCCTCATAAAATCCAGGCAACGGCTCTTATATATTTTAAGAGATTCTACTTACAATGGTCTGTGATGCAACATAATCCCAAAAATGTGATGTTGACTTGCATTTATGCAGCTTGTAAGATAGAAGAAAATCATGTCTCAGCTGAGGAGCTTGGCAAGGGGATTTCACAGGATCATCAAATTATTCTCAATTATGAGATGATAGTTTATCAGAGTCTGGAATTTGATCTTATTGTTTATGCACCTTACCGATCAGTTGAAGGCTATGTACATGATATGGAGGAAGTCTTCCATGAGAATGCTGAAAGGCTTCAAATGCTGAAGGAAACAGCATCGTTAGAGGTTGATAAAATTATGTTAACAGATGGCCCACTTCTCTTCCCTCCTGGGCAGTTAGCATTGGCTGCATTGCGCAGATCAAATGAAGTTCATGGAGTTATTGACTTTGAAAGGTACCTGGATAGTATTCTCTCTCGCCAAAATTCTGCACATATAATTTCTGAGCTCTATGAGCGTTTTAGTTCAATTGACTCATGGATTAATAAATATGCATTCCCTTCAGAAAAGGACTTAAAGCACATCAACAGAAAATTAAAATCTTGCTGGGGACTGGGCTCCAATGACGAGAGTAAAAAAAGGGAGAAGAAATCAAAGCACAAATCAAAGAAGAGTTCGAATGAAATGCAGAATATGCCTTCGCACACTTAG | 999 | 39.74 | MADFQTSTQRAKWILSPHELVGRYKAANQRAIEALEKFGATLMVVDADGSLSYPDPLINSKENADKHSRPKPLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQSLEFDLIVYAPYRSVEGYVHDMEEVFHENAERLQMLKETASLEVDKIMLTDGPLLFPPGQLALAALRRSNEVHGVIDFERYLDSILSRQNSAHIISELYERFSSIDSWINKYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSKKSSNEMQNMPSHT | 332 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 3374141 | 3381204 | - | CmoCh07G007460.1 | Cmo07g00746 | 386054 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo07g00746 | 332 | Pfam | Cyclin, N-terminal domain | 67 | 174 | IPR006671 | - | |
Cmo07g00746 | 332 | Pfam | Cyclin C-terminal domain | 179 | 273 | IPR031658 | - | |
Cmo07g00746 | 332 | SUPERFAMILY | Cyclin-like | 179 | 300 | IPR036915 | - | |
Cmo07g00746 | 332 | MobiDBLite | consensus disorder prediction | 298 | 332 | - | - | |
Cmo07g00746 | 332 | PANTHER | CYCLIN-H | 1 | 328 | - | - | |
Cmo07g00746 | 332 | PANTHER | CYCLIN | 1 | 328 | IPR043198 | GO:0006357|GO:0016538 | |
Cmo07g00746 | 332 | CDD | CYCLIN | 81 | 167 | IPR013763 | - | |
Cmo07g00746 | 332 | Gene3D | - | 63 | 175 | - | - | |
Cmo07g00746 | 332 | SUPERFAMILY | Cyclin-like | 65 | 176 | IPR036915 | - | |
Cmo07g00746 | 332 | Gene3D | - | 177 | 279 | - | - | |
Cmo07g00746 | 332 | SMART | cyclin_7 | 87 | 168 | IPR013763 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo07g00746 | Cmo-Chr7:3374141 | Cmo18g00515 | Cmo-Chr18:3730460 | 1.20E-07 | dispersed | |
Cmo03g01013 | Cmo-Chr3:7596081 | Cmo07g00746 | Cmo-Chr7:3374141 | 4.08E-133 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo07g00746 | K06634 | - | csv:101220754 | 584.719 |