Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g00746 ATGGCCGATTTCCAGACCTCGACTCAACGAGCCAAATGGATCTTGAGTCCTCACGAGCTGGTTGGCAGGTACAAAGCTGCTAACCAGAGAGCAATTGAAGCTCTGGAGAAGTTTGGAGCAACACTGATGGTGGTAGATGCTGACGGATCATTGTCCTATCCAGACCCTCTGATAAATTCAAAAGAAAATGCTGACAAACATTCCCGCCCCAAACCTTTGAGTATTGAAGAAGAGCAATTTATGCGAGTATTTTACGAGAACAAACTTCAAGAAGTATGCAACAATTTTCATTTTCCTCATAAAATCCAGGCAACGGCTCTTATATATTTTAAGAGATTCTACTTACAATGGTCTGTGATGCAACATAATCCCAAAAATGTGATGTTGACTTGCATTTATGCAGCTTGTAAGATAGAAGAAAATCATGTCTCAGCTGAGGAGCTTGGCAAGGGGATTTCACAGGATCATCAAATTATTCTCAATTATGAGATGATAGTTTATCAGAGTCTGGAATTTGATCTTATTGTTTATGCACCTTACCGATCAGTTGAAGGCTATGTACATGATATGGAGGAAGTCTTCCATGAGAATGCTGAAAGGCTTCAAATGCTGAAGGAAACAGCATCGTTAGAGGTTGATAAAATTATGTTAACAGATGGCCCACTTCTCTTCCCTCCTGGGCAGTTAGCATTGGCTGCATTGCGCAGATCAAATGAAGTTCATGGAGTTATTGACTTTGAAAGGTACCTGGATAGTATTCTCTCTCGCCAAAATTCTGCACATATAATTTCTGAGCTCTATGAGCGTTTTAGTTCAATTGACTCATGGATTAATAAATATGCATTCCCTTCAGAAAAGGACTTAAAGCACATCAACAGAAAATTAAAATCTTGCTGGGGACTGGGCTCCAATGACGAGAGTAAAAAAAGGGAGAAGAAATCAAAGCACAAATCAAAGAAGAGTTCGAATGAAATGCAGAATATGCCTTCGCACACTTAG 999 39.74 MADFQTSTQRAKWILSPHELVGRYKAANQRAIEALEKFGATLMVVDADGSLSYPDPLINSKENADKHSRPKPLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQSLEFDLIVYAPYRSVEGYVHDMEEVFHENAERLQMLKETASLEVDKIMLTDGPLLFPPGQLALAALRRSNEVHGVIDFERYLDSILSRQNSAHIISELYERFSSIDSWINKYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSKKSSNEMQNMPSHT 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3374141 3381204 - CmoCh07G007460.1 Cmo07g00746 386054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g00746 332 Pfam Cyclin, N-terminal domain 67 174 IPR006671 -
Cmo07g00746 332 Pfam Cyclin C-terminal domain 179 273 IPR031658 -
Cmo07g00746 332 SUPERFAMILY Cyclin-like 179 300 IPR036915 -
Cmo07g00746 332 MobiDBLite consensus disorder prediction 298 332 - -
Cmo07g00746 332 PANTHER CYCLIN-H 1 328 - -
Cmo07g00746 332 PANTHER CYCLIN 1 328 IPR043198 GO:0006357|GO:0016538
Cmo07g00746 332 CDD CYCLIN 81 167 IPR013763 -
Cmo07g00746 332 Gene3D - 63 175 - -
Cmo07g00746 332 SUPERFAMILY Cyclin-like 65 176 IPR036915 -
Cmo07g00746 332 Gene3D - 177 279 - -
Cmo07g00746 332 SMART cyclin_7 87 168 IPR013763 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g00746 Cmo-Chr7:3374141 Cmo18g00515 Cmo-Chr18:3730460 1.20E-07 dispersed
Cmo03g01013 Cmo-Chr3:7596081 Cmo07g00746 Cmo-Chr7:3374141 4.08E-133 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g00746 K06634 - csv:101220754 584.719