Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo07g00804 | ATGGGTTTAAACAAGCCTTATGTTGCTGCATTCTTCATCCAAATCACCTTCGCCGGAATGAGCCTCATGTCCAAGGCTGCCTTTGCTGCTGGTATGAACACTTACATCTTCCTCTTCTATCGTCAAGCTGCTGGTACCATCGTCTTGGTCCCTCTCACTTTCATCTTAAAAGGGAAGGAGAAGCGACCATTGACTTTCAAGCAACTCTGCGAGATTTTTGTCATTTCATCGATCGGGATTACTCTTGCATTGGATGCTTATGGAATGGCGATTAATTACACGTCAGCAACTCTTGGTGCTGCAGCATTTAACTGTGTTCCTGTCACAACGTTCTTCTTCGCCGTCTTATTAAGAATGGAGATGGTGAACTTAAAGACAGCGGGAGGAATTGCAAAGGTGGTGGGCATAATGGTATGCATGGCTGGTGCAGCCATTCTTGCTTTCTACAAAGGCCCCTACTTGAAGCCACTTTTCACTCACCAACTATTCCACCATGCCCAATCCCAACCTCACCACCCTCCTAACTCCCAAAGCACATGGATGATCGGCTGTTTCTTCCTCCTCGTCACGAGTATCTCTTGGGGCATATGGTTCGTCCTCCAGGCTCGGTTCTTAAAGGGATACCCTCACCTAATGGAGTTCATGTGCGTGCAAACCGTGATGAGTATGGTTCAGTCCTTCGTCGTAGCCATAGCTATGGAAAGAGACCCTTTGGAGTGGAAATTGGGGTGGAATGTTAGGCTCTTTGCCGTACTCTATTGTGGCATTTTGGTAATTGGAATTGCAAATAATGGGCAATGTTGGGTAATCAGAGAGAAGGGTCCAGTTTTTCAAGCCATGACAACGCCGTTGAATTTAATAGCAACAATCATTGGTTCCCAGCTAATCTTGTCGGAAGGAATTTACTTAGGAAGTATAATAGGTGCATGCTTCTTGGTGATGAGTCTTTACAGTGTTTTGTGGGGAAAAAACAAAGAGCTAGGAGCTACTTCAAGCAGTCAACCAGCTCCACTAGAGAAAGAGATAGAAGAGTTGACATCTCGAGCTCAAGTCAACTCCTCAATAATCTAA | 1071 | 45.28 | MGLNKPYVAAFFIQITFAGMSLMSKAAFAAGMNTYIFLFYRQAAGTIVLVPLTFILKGKEKRPLTFKQLCEIFVISSIGITLALDAYGMAINYTSATLGAAAFNCVPVTTFFFAVLLRMEMVNLKTAGGIAKVVGIMVCMAGAAILAFYKGPYLKPLFTHQLFHHAQSQPHHPPNSQSTWMIGCFFLLVTSISWGIWFVLQARFLKGYPHLMEFMCVQTVMSMVQSFVVAIAMERDPLEWKLGWNVRLFAVLYCGILVIGIANNGQCWVIREKGPVFQAMTTPLNLIATIIGSQLILSEGIYLGSIIGACFLVMSLYSVLWGKNKELGATSSSQPAPLEKEIEELTSRAQVNSSII | 356 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 3703448 | 3705932 | + | CmoCh07G008040.1 | Cmo07g00804 | 386112 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo07g00804 | 356 | PANTHER | WAT1-RELATED PROTEIN | 5 | 333 | IPR030184 | GO:0016021|GO:0022857 | |
| Cmo07g00804 | 356 | PANTHER | WAT1-RELATED PROTEIN | 5 | 333 | - | - | |
| Cmo07g00804 | 356 | Pfam | EamA-like transporter family | 181 | 320 | IPR000620 | GO:0016020|GO:0016021 | |
| Cmo07g00804 | 356 | Pfam | EamA-like transporter family | 6 | 134 | IPR000620 | GO:0016020|GO:0016021 | |
| Cmo07g00804 | 356 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 40 | 149 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cmo02g00591 | Cmo07g00804 | CCT | |
| Cmo07g00804 | Cmo20g01088 | CCT | |
| Cmo03g01066 | Cmo07g00804 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo07g00804 | Cmo-Chr7:3703448 | Cmo20g01088 | Cmo-Chr20:10336094 | 6.22E-100 | dispersed | |
| Cmo20g01086 | Cmo-Chr20:10308282 | Cmo07g00804 | Cmo-Chr7:3703448 | 5.34E-53 | dispersed | |
| Cmo07g00804 | Cmo-Chr7:3703448 | Cmo07g00805 | Cmo-Chr7:3711177 | 4.29E-161 | tandem | |
| Cmo04g02564 | Cmo-Chr4:18779783 | Cmo07g00804 | Cmo-Chr7:3703448 | 8.13E-95 | transposed | |
| Cmo03g01066 | Cmo-Chr3:7944503 | Cmo07g00804 | Cmo-Chr7:3703448 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo07g00804 | - | - | csv:101205842 | 587.415 |