Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g00829 ATGCCTGCTTGGTGGGCAAGAAAATTCAGTAAAAACAAAGAGCATCACAATCCCCCCACTAATTTTCTCAACTTCTCTAAATCTTCTACTTCTTCCCCTAAATCTGAGCCTAAGAAGGGGGCAGACACCCCCAGGAGCTTCGATGACCTCTCTTCTCTGATTTTCTCTCGTAATTCCCCCAGGCCTTCCAGGGATCTGGCCTCTTCTGGGGTTGCTGATGGCGGCGGCGGCGGCTCTTCTGGGTTCTCTGGTTTTGACTCCGATAGTGGGGATAAGAGTCACCCTCTTCCGAGACCTGCTACTCCCCCCGCTTTTGGGATTGATCATGGAGTCGGGATTGGATCTGGGTCTGTTTCGGTTTCCAGTGTTAGCTCTTCTGGGTCTTCGGATGATCATCCATCGAATCAAGAACAGCTTCAGTTTGGAGCTTACAGAGGATTTGCTGATACCAGAATAGAGGCAAGGCCAAGAAGTCCCGGTCCAGGATCGAGAGGACCCGCGAGTCCTACATCGCCTCTGAACTCACGGTTCTGTGGCATGAGTCTTGAATCTCCGACCGGCAAGCTAGATGATGGGAAGAGTCGATGTCATAAGCTGCCGCTTCCTCCAAGCTCTCCCACCAGCCCTTCTTCGTTGACCAGCACGAAAGCTGTCAATATCGGTGATAACGACCCGGCTACCCAATCGAAGTGGAAGAGAGGAAGGCTTCTAGGAAGGGGAACATTTGGGCACGTTTACCTTGGATTTAACAGTGTAAGTGGCCAAATGTGTGCAATTAAGGAGGTCAAGGTTATTAGCGATGACTCGACATCGAAGGAATGTCTCAAGCAATTGAATCAGGAGATAACCGTGCTCAGTCAGCTGTCGCATCCGAACATCGTCCGGTACTATGGTAGTGAAATGGGTGAGGAATCGCTCTCCGTCTATTTAGAATACATCTCCGGTGGCTCAATCCACAAATTACTACAAGAATATGGCGCCTTCAAAGAACCCGTTATAAGAAATTATACCCGAAAGATTCTTTCTGGGCTCGCGTATCTGCATGGGAGAAATACAGTGCATAGGGACATCAAAGGGGCTAATATCTTGGTGGATCCAAATGGCGAGGTCAAGTTGGTCGACTTTGGCATGGCAAAACACATGACGAATTGTACTTCGATGCTTTCGTTCAAAGGCAGTCCTTATTGGATGGCCCCCGAGGTTGTGATGCATACAAATGGGTATAGTCTTGCTGTAGATATTTGGAGTTTAGGGTGTACGGTTCTCGAAATGGCAACGTCTAAGCCACCTTGGAGCAAATACGAAGGGGTGGCTGCCATATTCAAAATTGGAAATAGCAAAGATATGCCTGAAATCCCAGACCATCTCTCCTATGATGCTAAAAACTTTGTGCAGCTATGTTTACAACGCGATCCATCGGCACGTCCTTCCGCTGCAGAACTGCTGGATCACCCTTTTGTTCAAGATGCAGTAACACCAAGAGCATCTGATGTTAACTTTTCCATGGATGCATTTCCCTTTAGCTTCGACGGTTTCCAGACTCCGCCATTGTTAGATCAGCATCCAAACAGAAAAAGTATAAGCATATGTGATGGAGACTACGTGACAAACCTGACAACCTCGTCGAGAGCTTTGAGGAGTCCTAGGGGAAATGCACGAATGATCACGTCCTTGCCTGTCTCTCCGTCTTCGAGTCCGTTACGGTCGTATGGCCCGCTACACCAGAGCTGTTATCGTTCACCACCTCACACATCTTACATGGGGTTGGGTCAAAGCTGTTACAATTTAAACGAATACGCATATAACACGAGACCAAACACATTGTTCACTCTCGACCCATCACGAGATTCATCGCTATTGAAAGTGCAGACTCATGGTGGATCACCAAGAAGACCTCTTTGA 1902 48.05 MPAWWARKFSKNKEHHNPPTNFLNFSKSSTSSPKSEPKKGADTPRSFDDLSSLIFSRNSPRPSRDLASSGVADGGGGGSSGFSGFDSDSGDKSHPLPRPATPPAFGIDHGVGIGSGSVSVSSVSSSGSSDDHPSNQEQLQFGAYRGFADTRIEARPRSPGPGSRGPASPTSPLNSRFCGMSLESPTGKLDDGKSRCHKLPLPPSSPTSPSSLTSTKAVNIGDNDPATQSKWKRGRLLGRGTFGHVYLGFNSVSGQMCAIKEVKVISDDSTSKECLKQLNQEITVLSQLSHPNIVRYYGSEMGEESLSVYLEYISGGSIHKLLQEYGAFKEPVIRNYTRKILSGLAYLHGRNTVHRDIKGANILVDPNGEVKLVDFGMAKHMTNCTSMLSFKGSPYWMAPEVVMHTNGYSLAVDIWSLGCTVLEMATSKPPWSKYEGVAAIFKIGNSKDMPEIPDHLSYDAKNFVQLCLQRDPSARPSAAELLDHPFVQDAVTPRASDVNFSMDAFPFSFDGFQTPPLLDQHPNRKSISICDGDYVTNLTTSSRALRSPRGNARMITSLPVSPSSSPLRSYGPLHQSCYRSPPHTSYMGLGQSCYNLNEYAYNTRPNTLFTLDPSRDSSLLKVQTHGGSPRRPL 633
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3882446 3886877 + CmoCh07G008290.1 Cmo07g00829 386137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g00829 633 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 3 1 610 - -
Cmo07g00829 633 MobiDBLite consensus disorder prediction 167 181 - -
Cmo07g00829 633 MobiDBLite consensus disorder prediction 49 65 - -
Cmo07g00829 633 SMART serkin_6 231 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo07g00829 633 MobiDBLite consensus disorder prediction 208 226 - -
Cmo07g00829 633 MobiDBLite consensus disorder prediction 153 229 - -
Cmo07g00829 633 Gene3D Transferase(Phosphotransferase) domain 1 227 504 - -
Cmo07g00829 633 SUPERFAMILY Protein kinase-like (PK-like) 229 579 IPR011009 -
Cmo07g00829 633 CDD STKc_MEKK1_plant 230 487 - -
Cmo07g00829 633 MobiDBLite consensus disorder prediction 16 37 - -
Cmo07g00829 633 ProSitePatterns Protein kinases ATP-binding region signature. 237 260 IPR017441 GO:0005524
Cmo07g00829 633 MobiDBLite consensus disorder prediction 1 139 - -
Cmo07g00829 633 Pfam Protein kinase domain 232 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo07g00829 633 MobiDBLite consensus disorder prediction 115 139 - -
Cmo07g00829 633 ProSiteProfiles Protein kinase domain profile. 231 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo07g00829 633 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 610 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g01082 Cmo07g00829 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g00829 Cmo-Chr7:3882446 Cmo18g01283 Cmo-Chr18:12410799 1.40E-143 dispersed
Cmo03g01082 Cmo-Chr3:8095928 Cmo07g00829 Cmo-Chr7:3882446 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74477 PF00069 Pkinase 6.20E-73 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g00829 K04421 - csv:101203907 954.896