Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g00843 ATGGCAATTGACCAGGCTGAGCTTAGCACTGAGCAGGTTCTCACAAGGGACATTCCATGGGAGACATACATGACTACTAAACTTATCAATGGAACAAGCCTTCAGCTGTTAAGGCGTTACGATAACAGACCAGAGAGTTACAGGGCACAGTTGTTGGATGATGATGGTCCAGCTTATGTTCGTGTATTTGTTAGCATTTTACGAGATATATTTAAGGAAGAAACAGTGGAATATGTTTTAGCATTAATCGACGAAATGCTTACAGCAAACCCAAAAAGAGCAAGATTGTTCCATGATGATTCTCTTGCTAGTGAAGATACTTATGAACCTTTCCTAAGATTGCTTTGGAAGGGCAATTGGTTCATACAGGAGAAGAGCTGTAATATACTTGCTCTGATAGTGAGTGCTAGAAAAAAAACACATGATGGCAGTTATGCAAATGGTGATGCCTCGAACTCCAAGAGGAAAATTACTACCATTGATGATGTTTTGGATGGACTGGTGAAATGGCTTTGTGCACAGCTGAAGAATCCTTCACATCCCAGTCGTGCTGTACAGACTTCTGTCAATTGCCTTGCAACTCTGCTGAAGGAACCAAAAGTCAAATCCTCCTTTGTCCAAGCAGATGGAGTGAAGCTGCTCATCCCTTTGATTTCTCCTGCGTCGACTCAACAATCTATTCAGATTCTGTATAAAACATGTTTTTGTGTTTGGCTTTTATCATATTATGAGCCGGCTATTGAATTCTTGGCCACTTCCAGAACCCTTCCAAGACTTATTGATGTCGTCAAGAGTTCCACAAAAGAGAAGGTTGTCCGAGTCGTTATTTTGACATTAAAGAACTTACTTCACAAGGGGACATTTGGAGCTCAAATGGTGGGTCTCGGACTACCACAAGTTGTTCAAAGTTTGAAATCCCAAGCATGGAGTGATGAGGACCTTTTGGATGCTTTGAATCAACTAGAAGAAGGGCTGAAAGATAACATCAAGAAACTAAGTTCTTTTGACAAGTATAAGCAAGAAGTCCTTCTAGGCCATCTTGACTGGTCTCCTATGCACAAAGACGTAAATTTCTGGCGCGAAAATATCACAAGCTTCGAAGAGAACGACTTCAAGCTATTGAGGGTCCTTATCACCATTCTGGATTCGTCGAGTGATCCAAGGGCTCTAGCAGTCGCTTGTTTTGATCTTTCCCAGTTCATTCAGCACCATCCTGCTGGGAGAGTTATAGTGACAGACTTGAAGGCGAAGGAAAGAGTGATGAAACTGATGAATCATGAGAATGCTGAAGTTACCAAATATTCCCTCCTCTGTATTCAAAGGCTGTTCCTAGGTGCCAAGTATGCCAGCTTTCTGCAGGCTTAA 1365 41.9 MAIDQAELSTEQVLTRDIPWETYMTTKLINGTSLQLLRRYDNRPESYRAQLLDDDGPAYVRVFVSILRDIFKEETVEYVLALIDEMLTANPKRARLFHDDSLASEDTYEPFLRLLWKGNWFIQEKSCNILALIVSARKKTHDGSYANGDASNSKRKITTIDDVLDGLVKWLCAQLKNPSHPSRAVQTSVNCLATLLKEPKVKSSFVQADGVKLLIPLISPASTQQSIQILYKTCFCVWLLSYYEPAIEFLATSRTLPRLIDVVKSSTKEKVVRVVILTLKNLLHKGTFGAQMVGLGLPQVVQSLKSQAWSDEDLLDALNQLEEGLKDNIKKLSSFDKYKQEVLLGHLDWSPMHKDVNFWRENITSFEENDFKLLRVLITILDSSSDPRALAVACFDLSQFIQHHPAGRVIVTDLKAKERVMKLMNHENAEVTKYSLLCIQRLFLGAKYASFLQA 454
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3963894 3972081 + CmoCh07G008430.1 Cmo07g00843 386151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g00843 454 CDD VATPase_H 4 448 - -
Cmo07g00843 454 Pfam V-ATPase subunit H 6 325 IPR004908 GO:0000221|GO:0046961|GO:1902600
Cmo07g00843 454 Gene3D - 345 446 IPR038497 -
Cmo07g00843 454 Pfam V-ATPase subunit H 331 443 IPR011987 GO:0000221|GO:1902600
Cmo07g00843 454 SUPERFAMILY ARM repeat 10 444 IPR016024 -
Cmo07g00843 454 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 400 407 IPR018506 GO:0020037
Cmo07g00843 454 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 1 454 - -
Cmo07g00843 454 Gene3D - 6 333 IPR011989 -
Cmo07g00843 454 PIRSF V-ATP_synth_H 2 453 IPR004908 GO:0000221|GO:0046961|GO:1902600
Cmo07g00843 454 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 1 454 IPR004908 GO:0000221|GO:0046961|GO:1902600
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g00843 Cmo-Chr7:3963894 Cmo14g00507 Cmo-Chr14:2506076 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g00843 K02144 - csv:101217015 859.366