Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g00855 ATGAACCTTAGATTTGTCTCTCTCTCTCTCGGCTTCCCTATCTTCTCTAACGACGTCGTTCCCTTCGGTAGTAAAGACTCGCGACGACAACAACTTCTTACGGCGACTACGAGCATCCGGATGGTGAGACCCACGTTTAACATCGGTGACCCGAATCAACTCACGTATGGAAAGCCACCAAATCAACTCACAAAACCAATGTCGTACAACATTGGGTCCTCCATAACTTTTGTCCTTTATCAGCGTTGTAAACGCGAGTTACGGCAAGACCCTCTTGGAAATCGAAGGGCCGAGGCTAAAATACTCAGGGGGCCACATGAGGACTTGGAAATGTACTTGGAAGCAATTAGTCAACTTCGAAGCGCTAATCGCTACTTTACTGGGAACAAAATTTTCCGAAGTAACGAAGCTATTCTTACCCATACAAGCAACTTGCTTGCAAAAGCCATTTCAAAGCTGGAAGATGAGTTCAGACAGCTTTTAACAAATTACAGTTCGAGGCTTGAAAAGTTTGTTCGTGACAGAAAGGTTATAACAGATGTTTGCCTCCTCTTCTCTGACTTAAATAAGCCAGTGGAACCCGATCGTCTTTTCGATTGCCTCCCCAACTCCTTGCGTCCATCTTCAGCATCTTCGCAGCAAGGTGATGGTGGTAGCAAACATAATTCTGACAATCACAACAAAAGCTTAGAAGCTTCCATCTTCATTCCCCCAACTCTTATTCCTCCCAGGGTTCTTCCATTGTTGCATGATTTGGCCCAACAAATGATTCTGGCTGGCCATCAGCAGCAAGTCTATAGAATATACAGGGAGACTCGCGCTGCAGTTTTAGAACAGAGTCTTAGGAAATTAGGTGTTGAGAGGCTTAGCAAGGACGATGTCCAGAAAATGCAGTGGGAGGCCCTTGAAGCTAAGATTGGGAACTGGATACATTACGTGCGCATTGCTGTCAAACTGCTGTTTACTGGGGAAAGGAAAATCTGTGATCAAATATTTGATAGTGCAGACGCTCTCGTGGATCAATGCTTCGCAGATGTGACATCAAATAATGTGTCAATGCTACTAAGTTTTGGAGACGCAATTGCCAAAAGCAAGAGGTCTCCAGAAAAATTGTTTGTTCTTCTAGACATGTTTGAAATAATGCGAGAACTGCAATCTGAGTTTAATTTCGGACTGGAGAAATGGATGACACCTTATGACTTCTCTTTCAAATGCCTAGACCGTAAGCAATTAACTTTTTCTTCCAAATATGGGACAAACTATCTTCATAAACTTTCAATTCACTCTCTAGAATCTCGTGAGAACTATTGGAATTTGAATATGGGTGACTTATTAAATACTGAATTTGCTAGAGAAAATCGATGTTACTTAAATTTTTATGCTTCTGTATGTGAGAAGACCAAAAACATGTTTCCACAAGTGCAACTTGCTAACACTATTATGTACTCTTTTTCCTTTTATTTTCGTTTGACGATTGAAACACTTTTTGGAAGTAAAGCATGCATTGAAATGCGTGATTCTGCATTGAGCTTAACACAACGCCTTGCCGAGACAGCTCAAGAGACTTTTGTTGATTTTGAAGAAGCAGTAGAAAAGGATGCCACAAAAACTGCTGTTCTTGATGGGACTGTTCATCCCTTGACCAGTTATGTGATAAACTACGTGAAGTTTTTATTTGACTACAAATCTACTTTGAAGCAACTATTCCAAGACTTCGAGGCTGTTGATCCAGATGCTCAGTTAGCAGTGATAACTACAAGAATTACGCAGGCACTTCAGACTAATCTTGACGGAAAATCTAAGCAATATAAGGATCCTGCATTAACTCAATTATTTCTGATGAACAATATTCACTATATAGTGAGATCTGTCCGTAGATCGGAGGCAAAGGATTTGTTGGGTGATGACTGGGTGCAGATACATCGAAGGATTGTGCAGCAGCATGCAAATCAATACAAAAGGATTTCTTGGGCCAAGATTTTGCAGTGCCTCACCGTTCAGGCCTCAGGCAGTGGTGGTGCTTCGGCAGATGCAACCTGTGGACTCTCGAAAGCTATGGTGAAAGATAGGTTTAAGACTTTCAATATCCAATTTGAGGAGCTTCATCAGCGGCAGTCTCAATGGACAGTTCCTGACAGTGAGTTGCGGGAGTCATTGAGGTTGGCAGTCGCTGAAGTATTATTGCCTGCCTACCGATCCTTCATCAAGCGCCTATGGTTGACAATGGGAAAACTGGTCTTCAAAGAAGCATCAAATATACACCTGAGGATCTTGAGCGTATGCTAA 2286 42.13 MNLRFVSLSLGFPIFSNDVVPFGSKDSRRQQLLTATTSIRMVRPTFNIGDPNQLTYGKPPNQLTKPMSYNIGSSITFVLYQRCKRELRQDPLGNRRAEAKILRGPHEDLEMYLEAISQLRSANRYFTGNKIFRSNEAILTHTSNLLAKAISKLEDEFRQLLTNYSSRLEKFVRDRKVITDVCLLFSDLNKPVEPDRLFDCLPNSLRPSSASSQQGDGGSKHNSDNHNKSLEASIFIPPTLIPPRVLPLLHDLAQQMILAGHQQQVYRIYRETRAAVLEQSLRKLGVERLSKDDVQKMQWEALEAKIGNWIHYVRIAVKLLFTGERKICDQIFDSADALVDQCFADVTSNNVSMLLSFGDAIAKSKRSPEKLFVLLDMFEIMRELQSEFNFGLEKWMTPYDFSFKCLDRKQLTFSSKYGTNYLHKLSIHSLESRENYWNLNMGDLLNTEFARENRCYLNFYASVCEKTKNMFPQVQLANTIMYSFSFYFRLTIETLFGSKACIEMRDSALSLTQRLAETAQETFVDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYKSTLKQLFQDFEAVDPDAQLAVITTRITQALQTNLDGKSKQYKDPALTQLFLMNNIHYIVRSVRRSEAKDLLGDDWVQIHRRIVQQHANQYKRISWAKILQCLTVQASGSGGASADATCGLSKAMVKDRFKTFNIQFEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFIKRLWLTMGKLVFKEASNIHLRILSVC 761
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4035693 4041910 + CmoCh07G008550.1 Cmo07g00855 386163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g00855 761 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 94 169 - -
Cmo07g00855 761 SUPERFAMILY Cullin repeat-like 96 389 IPR016159 -
Cmo07g00855 761 PANTHER EXOCYST COMPLEX PROTEIN EXO70 482 740 IPR004140 GO:0000145|GO:0006887
Cmo07g00855 761 Pfam Exo70 exocyst complex subunit 308 737 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cmo07g00855 761 Gene3D Exocyst complex component Exo70 93 395 - -
Cmo07g00855 761 Gene3D Exocyst complex component Exo70 447 744 - -
Cmo07g00855 761 SUPERFAMILY Cullin repeat-like 423 738 IPR016159 -
Cmo07g00855 761 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 482 740 - -
Cmo07g00855 761 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 184 389 - -
Cmo07g00855 761 PANTHER EXOCYST COMPLEX PROTEIN EXO70 94 169 IPR004140 GO:0000145|GO:0006887
Cmo07g00855 761 PANTHER EXOCYST COMPLEX PROTEIN EXO70 184 389 IPR004140 GO:0000145|GO:0006887
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g01110 Cmo07g00855 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01515 Cmo-Chr4:7747077 Cmo07g00855 Cmo-Chr7:4035693 1.56E-125 dispersed
Cmo07g00855 Cmo-Chr7:4035693 Cmo18g00956 Cmo-Chr18:10655880 3.89E-118 dispersed
Cmo07g00855 Cmo-Chr7:4035693 Cmo03g01110 Cmo-Chr3:8945812 9.55E-150 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g00855 K07195 - csv:105436018 458.373