Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g00911 ATGAAGCTGCCGATATTTGTAATCCCTCTGGTCGCCGTTTCTTGTCTTCTAGCTGTCTTGGGTCCTCAGTTTTCCTCCGACTGGACCAGTTTCTTCGATAAACATGCTTCCGCTTGGAGCTCTGTTTCTTCTCCCACCGAAACAGAGGATTTTCGTTCCAATACGATGGCGGCGGTCAACGACTCTGTTTCAAACCACTCTGTTTCCTCTCCTTTTTCTTCTTCTCCGCCGCCTCCGCCGCCGTCGTCATCCTCACCACCACCGCCGATCGACGAAAAACAGAGTCTTCCACAACCCCAAAACATGACGACAGTCAACGCAGTTTTGGAAGAAAACGCCATTAATGAAGGGAGAAACGTTTCGTCTGAAGGTAATTATGTACCGGCGGTGGTGAAGGCCAGAAAACAGAGGGAGTTTACGAAATTGGAAAAAATCGAAGCAGGGCTTAGACGAGCACGAGCCGCCATTAAAGAAACCAAGTTCCTGAACCAAACCCATGATCCGGATCTTGTTCCCTCTGGTCCGATGTATTGGAACGCCAAAGCGTTTCACAGGAGCTACTTAGAAATGGAGAAGGAGCTGAAGATCTTCGTGTACGAGGAAGGAGAGCCTCCCCTGTTTCACAATGGCCCCTGCAAGAGCATTTACTCGACTGAAGGCAACTTCATCCACGCCATTGAAATGGACACCAAGTTTCGAACCAAAGATCCCGACAAAGCCCATGTCTTCTTTCTTCCTCTAAGTGTTGCCATGCTCGTTCAGTTTGTCTACGTTCGCGACTCCCATGACTTCACACCGATACGACGCACAGTCGTCGATTATGTCAATGTCATTCGAACCAAATATCCGTTCTGGAATCGCACCCTTGGCGCCGATCATTTCATGCTGTCCTGCCATGATTGGGGGCCGGAAGCGTCAAGATCGGTTCCCCATTTGTACAAAAACTCCATTAGAGTACTCTGCAACGCCAACACGTCCGAAGGTTTCAACCCGTCAAAGGACGTTTCCTTCCCAGAAATCAACCTCCAAACGGGTTTCTTAACCGGAATTATAGGCGGCCCATCTCCCTCCCGCCGCCCAATTCTGGCGTTCTTCGCCGGCGGCCTCCACGGCCCCATAAGGCCTATTCTAATCCAGCAATGGGAGAATCAAGACAGCGACGTTCAAGTCCACAAATACCTCCCCAAAGACGTTTCTTACATCGACATGATGAGGAAGAGCAAGTTTTGCCTCTGCCCGAGTGGCTACGAAGTTGCTAGCCCTCGAATTGTCGAGGCCATTTACACCGGGTGCGTCCCGGTCCTCATTTCCGACCACTATGTCCCTCCATTCAGCGACGTTATCAATTGGAAATCTTTCTCGGTCTCCATCTCCGTCGAGGACATTCCCAGTTTGAAGACAATTCTCAGTGGGATATCGCCGAGGCAGTACCTGAGAATGTATCGGAGAGTGTTGAAGGTTAGGAGACACTTTGAAGTCCACTCTCCGCCTAAGAGATTTGATGTGTATCACATGATTCTTCATTCTGTGTGGCTTAGAAGACTCAATCTTAGGGTGCGCGACCGTTGA 1569 49.97 MKLPIFVIPLVAVSCLLAVLGPQFSSDWTSFFDKHASAWSSVSSPTETEDFRSNTMAAVNDSVSNHSVSSPFSSSPPPPPPSSSSPPPPIDEKQSLPQPQNMTTVNAVLEENAINEGRNVSSEGNYVPAVVKARKQREFTKLEKIEAGLRRARAAIKETKFLNQTHDPDLVPSGPMYWNAKAFHRSYLEMEKELKIFVYEEGEPPLFHNGPCKSIYSTEGNFIHAIEMDTKFRTKDPDKAHVFFLPLSVAMLVQFVYVRDSHDFTPIRRTVVDYVNVIRTKYPFWNRTLGADHFMLSCHDWGPEASRSVPHLYKNSIRVLCNANTSEGFNPSKDVSFPEINLQTGFLTGIIGGPSPSRRPILAFFAGGLHGPIRPILIQQWENQDSDVQVHKYLPKDVSYIDMMRKSKFCLCPSGYEVASPRIVEAIYTGCVPVLISDHYVPPFSDVINWKSFSVSISVEDIPSLKTILSGISPRQYLRMYRRVLKVRRHFEVHSPPKRFDVYHMILHSVWLRRLNLRVRDR 522
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4363035 4365667 - CmoCh07G009110.1 Cmo07g00911 386219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g00911 522 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Cmo07g00911 522 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 213 448 - -
Cmo07g00911 522 MobiDBLite consensus disorder prediction 63 97 - -
Cmo07g00911 522 PANTHER EXOSTOSIN FAMILY PROTEIN 106 520 - -
Cmo07g00911 522 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 106 520 IPR004263 GO:0006486|GO:0016757
Cmo07g00911 522 MobiDBLite consensus disorder prediction 72 94 - -
Cmo07g00911 522 Gene3D Glycogen Phosphorylase B; 356 495 - -
Cmo07g00911 522 Pfam Exostosin family 191 470 IPR040911 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g01182 Cmo07g00911 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g00377 Cmo-Chr5:1698043 Cmo07g00911 Cmo-Chr7:4363035 1.47E-158 dispersed
Cmo07g00911 Cmo-Chr7:4363035 Cmo09g01250 Cmo-Chr9:10767588 5.35E-177 dispersed
Cmo20g00550 Cmo-Chr20:2662170 Cmo07g00911 Cmo-Chr7:4363035 3.21E-31 dispersed
Cmo06g01746 Cmo-Chr6:11968709 Cmo07g00911 Cmo-Chr7:4363035 7.75E-46 transposed
Cmo08g00348 Cmo-Chr8:2151092 Cmo07g00911 Cmo-Chr7:4363035 1.88E-111 transposed
Cmo16g00801 Cmo-Chr16:4085144 Cmo07g00911 Cmo-Chr7:4363035 5.23E-83 transposed
Cmo03g01182 Cmo-Chr3:9249825 Cmo07g00911 Cmo-Chr7:4363035 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g00911 - - csv:101205910 839.721