Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g00921 ATGCCGATCCGTAACATTGCCATTGGAAGGCCCGAGGAGGCTACCCGACCCGATGCTTTGAAGGCCGGGTTGGCTGAATTCATTTCTACGTTGATTTTTGTTTTTGCCGGCCAGGGTTCCGGTATAGCCTTTGGTAAGCTTACTGACGGTGGTGCTGCCACCCCCGCCGGCCTTATCTCCGCTTCCATCGCCCATGCCTTCGCTCTTTTTGTCGCTGTCTCCGTCGGCGCCAACATCTCCGGCGGCCACGTCAACCCTGCTGTTACCTTTGGCGCCTTCGTTGGTGGCAACATCACCCTCCTACGTGGCATCATTTACTGGATCGCCCAGCTCCTCGGATCCGTCGTCGCTTGCTTGCTCCTTAAGTTCGTCACCGGCTTGCCTACGGGCAGCTTTGCTCTGTCTGCTGGAGTTGGGGAAGTAAACGCCTTCGTTTTTGAGATAGTGATGACATTTGGATTGGTGTACACGGTGTACGCGACCGCAGTGGATCCCAAGAAGGGCAGTTTGGGAACAATTGCACCGATCGCCATCGGTTTCATCGTCGGAGCCAACATTTTGGCCGGTGGAGCCTTCACCGGAGCGTCGATGAACCCTGCCGTAGCATTCGGACCGTCGGTGGTGAGCTGGTCATGGGACAACCACTGGGTCTACTGGGCCGGGCCTCTGGTCGGAGGTGGACTTGCTGGGCTCATCTACGAGTTCATCTTCATTTCCAACACCCACGAGCAGTTGCCAGTCACCGAGTACTGA 753 56.84 MPIRNIAIGRPEEATRPDALKAGLAEFISTLIFVFAGQGSGIAFGKLTDGGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIIYWIAQLLGSVVACLLLKFVTGLPTGSFALSAGVGEVNAFVFEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILAGGAFTGASMNPAVAFGPSVVSWSWDNHWVYWAGPLVGGGLAGLIYEFIFISNTHEQLPVTEY 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4427126 4428910 + CmoCh07G009210.1 Cmo07g00921 386229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g00921 250 Gene3D Glycerol uptake facilitator protein. 4 249 IPR023271 -
Cmo07g00921 250 PANTHER AQUAPORIN-8 1 246 IPR034294 -
Cmo07g00921 250 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo07g00921 250 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo07g00921 250 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo07g00921 250 PRINTS Major intrinsic protein family signature 146 164 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo07g00921 250 PRINTS Major intrinsic protein family signature 179 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo07g00921 250 PRINTS Major intrinsic protein family signature 216 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo07g00921 250 CDD MIP 21 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo07g00921 250 Pfam Major intrinsic protein 14 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo07g00921 250 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Cmo07g00921 250 SUPERFAMILY Aquaporin-like 13 244 IPR023271 -
Cmo07g00921 250 PANTHER AQUAPORIN TIP1-1 1 246 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo07g00921 Cmo14g00225 CCT
Cmo03g01198 Cmo07g00921 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g00921 Cmo-Chr7:4427126 Cmo13g00982 Cmo-Chr13:8400229 5.06E-103 dispersed
Cmo02g01579 Cmo-Chr2:9115713 Cmo07g00921 Cmo-Chr7:4427126 1.77E-102 transposed
Cmo14g00225 Cmo-Chr14:1039713 Cmo07g00921 Cmo-Chr7:4427126 2.65E-127 wgd
Cmo03g01198 Cmo-Chr3:9354988 Cmo07g00921 Cmo-Chr7:4427126 2.51E-172 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g00921 K09873 - csv:101204225 469.929