Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g01014 ATGAATATCCAAGTTAGCCGATGGTGTGCCTCAGCCAAACCTTTCCTGTCTGTGGTGTTCTTGCAGTTTGGGCTTGCAGGAATGGACATTCTGTCAAAAGCAGCTCTCAACCAAGGAATGAGCAACTATGTTCTTGTTGTTTATCGCCATGCAGTTGCCACAATTGTTATAGCTCCTTTTGCATTGATTTTTGACAAGAAGGTCAGACCAAAGATGACAATTCCAGTCTTTGCCAAGCTAATAGTCCTCAGCTTGCTAGAGCCTGTGATTGATCAGAACTTATATTTCTTGGGTATGAAGTACACAACAGCAACTTTTGCAGCTGCCATGTGCAATATTCTTCCAGCCATAACCTTTGTAATGGCTTGGATCCTCAGGCTTGAGAAGGTTAAAATCAAAAGCATCAGAAGCCAAGCGAAGATAGTGGGAACCATAGCAACAGTAGGAGGAGCCATGATAATGACACTGATTAAGGGCCCAATTTTAGAGCTATTTTGGGTAAACGAAAAAGCAGATCATCAACAACAACAAAGGGGTGATATCAGCCTTCAACACACAATCAAAGGCTCAATTATGATCACAATTGGCTGTTTCAGCTGGGCCTGCTTCATGATTCTTCAGGCAATCACTTTGAAAGCTTACCCCGCTGAGCTTTCTCTCACGGCTTGGATCTGCCTGTTGGGCACCGCGGAGGGCACTGTGTTGGCGCTGGTGATGGAAAGAGGAAATGCCGCCGTTTGGAGCATTACTTGGGGAACTAAACTGCTCGCCGCTGTTTATAGTGGAATATTCTGTTCAGGACTTGCTTATTACATTCAAGGAATAGTGATGAAAGACAAAGGACCTGTCTTTGTGACTGCCTTTAGCCCATTGAGTATGGTCATTGTTGCCATTATGAGTTCGTTCATTCTCGGCGAGCGTCTTTACTTCGGAAGGGTACTTGGAGCTGGTGTGATAATTGTAGGGCTATACCTTGTGGTTTGGGGCAAAAACAAAGATGGAAATGGCTCAAGTGAAGACCTCAAATTGCCCACCAAACAAACCCAAGAAATTGAAGCATAA 1062 44.26 MNIQVSRWCASAKPFLSVVFLQFGLAGMDILSKAALNQGMSNYVLVVYRHAVATIVIAPFALIFDKKVRPKMTIPVFAKLIVLSLLEPVIDQNLYFLGMKYTTATFAAAMCNILPAITFVMAWILRLEKVKIKSIRSQAKIVGTIATVGGAMIMTLIKGPILELFWVNEKADHQQQQRGDISLQHTIKGSIMITIGCFSWACFMILQAITLKAYPAELSLTAWICLLGTAEGTVLALVMERGNAAVWSITWGTKLLAAVYSGIFCSGLAYYIQGIVMKDKGPVFVTAFSPLSMVIVAIMSSFILGERLYFGRVLGAGVIIVGLYLVVWGKNKDGNGSSEDLKLPTKQTQEIEA 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5018602 5022385 - CmoCh07G010140.1 Cmo07g01014 386322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g01014 353 Pfam EamA-like transporter family 23 135 IPR000620 GO:0016020|GO:0016021
Cmo07g01014 353 Pfam EamA-like transporter family 188 327 IPR000620 GO:0016020|GO:0016021
Cmo07g01014 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 234 332 - -
Cmo07g01014 353 PANTHER WAT1-RELATED PROTEIN 9 336 IPR030184 GO:0016021|GO:0022857
Cmo07g01014 353 PANTHER WAT1-RELATED PROTEIN 9 336 - -
Cmo07g01014 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00455 Cmo-Chr3:5080508 Cmo07g01014 Cmo-Chr7:5018602 0 dispersed
Cmo07g01014 Cmo-Chr7:5018602 Cmo09g00792 Cmo-Chr9:4054770 2.24E-131 dispersed
Cmo15g00424 Cmo-Chr15:1916632 Cmo07g01014 Cmo-Chr7:5018602 8.84E-131 wgd
Cmo04g02746 Cmo-Chr4:19879893 Cmo07g01014 Cmo-Chr7:5018602 1.99E-138 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g01014 - - csv:101217902 632.484