Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g01023 ATGAGCGTGAACATAACCTCCATTAAAACCGCCTCCAACGGCGTCTGGCAAGGCGACAATCCACTCAATTTCGCCTTCCCTCTTTTGATCCTTCAATCCGTTTTGATTCTCCTCCTCACCCGCCTCCTCGCCGCCGTCCTCAAGCCCCTCCGCCAGCCCAAAGTCATCGCCGAAATCCTCGGCGGGATTCTTCTGGGTCCCTCTGTTTTTGGTCGGAATCAAGTTTATTTGAACTGGGTTTTTCCGGATTGGAGTACTCCGATTCTTGAATCGGTTGCTAGTATTGGGTTGTTGTTCTTTTTGTTTTTGGTTGGATTGGAACTCGATTTGTCCTCTGTTCGCCGTAGTGGGCGGCGGGCTTTTGGAATCGCCGTCGCTGGAATCTCCGTTCCTTTCCTCTCCGGCACCGGCATCGCCTTTGTACTTCGGAAAACCGTCGCCGGTGCCAATAACGTCGGGTACTGGCAATTTGTTGTGTTCATCGGCGTTGCTCTGTCCATTACTGCTTTTCCTGTTCTGACGCGCATTTTAGCGGAGCTTAAGCTTCTCACCACCGAAGTCGGCGAGATTGCCATGGCGGCCGCCGCATTCAACGACATGGCTGCTTGGATTCTCCTCGCACTCGCCATTGCTCTAACGGGCAACGACAACTCTGTTACAGTACAGAGAAGTTCGTTAGTTTCCGTGTGGGTCCTACTCTCTGGAGCTGGATTTGTCGTTTTCATGATGACGGTGGTCCGACCAGGAATGAAGTGGGTTGCACGGCGGTGTTCGTACGAGGATGACGCGGTGGAGGAAGGGTATGTCTGTTTGACGTTGATCGGAGTGTTGGTTTGTGGGTTTGTAACGGATTTGATCGGAATTCATTCGATTTTTGGGGGTTTTGTGTTTGGATTGACGGTGGCGAAGGAGGGGAGATTCGCGGAGAGATTGATTGAGAGGATTGAGGATTTCGTGTCGGGGCTTCTTCTTCCTCTGTATTTTGCGTCGAGTGGGTTGAAGACGAATGTGACGAAGATCAACGGCGGAAAATCATGGGGGCTGCTGGCGCTGGTTATTTCCACGGCGTGTGCAGGGAAGATTCTGGCGACGTTTGCGGCGGCGATGGCGTTTTTAATGCCGGCGAGGGAGGCGATGGCTTTGGGATTGCTTATGAACACTAAAGGCTTGGTGGAACTCATCGTGCTCAATATTGGGAAGGAGAAAAAGATTCTTCGTCCAATTTTGGGAACGTGGGAAGTGTTAATGGCACTATTCACAACCTTCATCACCACCCCCACCGTGATGGCAGTCTACAAGCCAGCCCGCGCGGCGGCCGCCACCCGAACCCAGCGCAAACTCCGCCACCTCTCTGGCGCCGGGAACTCCACCAACGACAAGTCACTAACAATCCTAGCCTGCCTCCACAGCTTAGGCAACGTACCTGCCCTAATCAGCCTGACCGAGTCAACTCGCAGCACCAAAACCTCGTCCCTCAAACTCTTCGTCATGCACCTCGTCGAACTCACCGAGCGCTCCTCCTCAATCCTAATGGCCCAACGCGCCCGCAAGAACGGCTTCCCTTTCTTCGCAAGGTTCCGCAAGGCCAGCGAGTGGCACGACCAGATGGCCGCCGCCTTTCAGGCCTACAGCCAGCTGGGCCGGGTCAAGGTCCGGCCCACCACAGCGGTCTCTTCCTTAACCACAATGCACGAGGACATCTGCGGCGTGGCGGACGATAAGAGAGTGGCGATGATCATCTTGCCGTTTCATCGGAATTGGAGGACGGTCAGCGGCGTGGAGGAGAATATGGGCCATGGGTGGAGAGTTGTGAACCAGCGGGTGCTGAAGAGTGCGCCTTGCTCGGTGGCGGTTCTTGTGGACCGGGGGTTAGGAGCGGTGGTTGGTGCGGCACAGAGCATTTGTGTGATGTTTTTTGGTGGTCCTGATGACCGGGAGGCGCTGGAATTGGGTGGACGGATGGCGGAGCATCCGGCGGTGAAGGTCACGGTGGTGAGGTTTCGGGCGTCGCCGCCGTCGGATGTAGTGGAGGGTAGTAAGGTCATTTCGCGACATATGTATTCTAAATCTAGCGACAGTCATTATAGCTTCTCCACTGCTCCAATAAACTGGGAAAAAGAAAAGGGTCGGGTTCCGTCGAGCATGGTGGCAAAACTAGCAGACCGGGCGGCGGAGCACTCAGAGTTAGGGCCGATCGGGGACATATTGAGCAGCTCCGGCAGGGGAATAGTATCTTCAATTCTAGTAATTCAACAACACGAAGAAGAAGAAACTCCAGCATTGAATAAGCAGTCTTTCTCAATCATAGGAGCTTCCATTAATGTATAA 2328 54.04 MSVNITSIKTASNGVWQGDNPLNFAFPLLILQSVLILLLTRLLAAVLKPLRQPKVIAEILGGILLGPSVFGRNQVYLNWVFPDWSTPILESVASIGLLFFLFLVGLELDLSSVRRSGRRAFGIAVAGISVPFLSGTGIAFVLRKTVAGANNVGYWQFVVFIGVALSITAFPVLTRILAELKLLTTEVGEIAMAAAAFNDMAAWILLALAIALTGNDNSVTVQRSSLVSVWVLLSGAGFVVFMMTVVRPGMKWVARRCSYEDDAVEEGYVCLTLIGVLVCGFVTDLIGIHSIFGGFVFGLTVAKEGRFAERLIERIEDFVSGLLLPLYFASSGLKTNVTKINGGKSWGLLALVISTACAGKILATFAAAMAFLMPAREAMALGLLMNTKGLVELIVLNIGKEKKILRPILGTWEVLMALFTTFITTPTVMAVYKPARAAAATRTQRKLRHLSGAGNSTNDKSLTILACLHSLGNVPALISLTESTRSTKTSSLKLFVMHLVELTERSSSILMAQRARKNGFPFFARFRKASEWHDQMAAAFQAYSQLGRVKVRPTTAVSSLTTMHEDICGVADDKRVAMIILPFHRNWRTVSGVEENMGHGWRVVNQRVLKSAPCSVAVLVDRGLGAVVGAAQSICVMFFGGPDDREALELGGRMAEHPAVKVTVVRFRASPPSDVVEGSKVISRHMYSKSSDSHYSFSTAPINWEKEKGRVPSSMVAKLADRAAEHSELGPIGDILSSSGRGIVSSILVIQQHEEEETPALNKQSFSIIGASINV 775
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5063025 5066727 - CmoCh07G010230.1 Cmo07g01023 386331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g01023 775 Gene3D - 480 738 - -
Cmo07g01023 775 Gene3D - 28 441 IPR038770 -
Cmo07g01023 775 Pfam Sodium/hydrogen exchanger family 35 428 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cmo07g01023 775 PANTHER CATION/H + ANTIPORTER 708 760 - -
Cmo07g01023 775 PANTHER CATION/H + ANTIPORTER 3 668 - -
Cmo07g01023 775 PANTHER BNAC06G14930D PROTEIN 708 760 - -
Cmo07g01023 775 PANTHER BNAC06G14930D PROTEIN 3 668 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g01023 Cmo-Chr7:5063025 Cmo16g00620 Cmo-Chr16:3029204 0 dispersed
Cmo03g00449 Cmo-Chr3:5050317 Cmo07g01023 Cmo-Chr7:5063025 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g01023 - - csv:101207589 1080.86