Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g01038 ATGGGCAGAATCGTTGTAGCCGCTATCGTGAGTTTGTGGGTGGTTCCGATCTCCATCCTCGTCAACCGCATTGTTCCCGATCCTTATATGGACGAGATATTTCACATACCTCAAGCTCAGAAATACTGCAGTGGGAACTTCAGAAGTTGGGATCCCATGATTACAACTCCTCCTGGACTGTACTATCTTTCACTCGCCCATGTTGCTTCTCTGTTTCCAGCCACTATCTTTACTCAAGCAGCACCATCATTTTCTGAAGCCTGTTCCGTTCGGATTCTCCGTTCAACCAATGGGATTTTTGCAGTTTTGTGCAGTGTTCTTGTGTATGAGATAATCTCCCATTTAAGGCCAAATCTTGATGATAAGAAGGCAACAACTTATGCTGTGATTTTGTCACTTTACCCACTCCATTGGTTCTTCACTTTTCTTTATTACACTGATGTTGCATCACTTACAGCAGTCCTTGCTATGTACTTAGCATGCTTGAAGAAGAATTACTGGTCGAGTGCATTGTTTGGTATCTTTGCAGTTGTCATTCGACAAACAAATATTATATGGATGCTTTTTGTAGCATGCTCTGCCGTTATTGATACTACTCTGACTTGCCACGATGATAATATACAAATGCATGAGAATGATGTAATGGTGGAGGAAAGTAATCCTTTGAATGCTAAAGGAAGTCCCATTTCTAGAGCAAACTTGCGAAAGAGAAAGTTTATTACCACAAAAGATGCTGGCAAACAATTTCGACATAGCACAAGATCTTCATTGATAGACCAGAAATCAGGTTTATTGGATGAGATCAGAGCCCTGATATTGACCGTGTGGCATATGAAATTTAAGCTTTTGGTTTCATTTTGCCCCTTTGTAATTGTGCTTATGGCGTTTGTTGCTTTTGTTCGTTGGAACGGAAGTATCGTTCTTGGTGCAAAGGAAGCTCATGCAGTCTCTCTACATTTTGCACAGATTATGTATTTTGGTCTTTTTTCTGCTCTAGTTATGGCTCCAATGCACTGTAATCCAAGTCAAGTCATAGATGTGTTTCACTCACTCTGGAAAGGCAGACCTCTAAGTTTCTTACAAGTTTTCATTGCTCTTCTTGCTGGCTTCATCTTCGTACACTATTTCAGCATCGCTCACCCGTATCTTCTAGCTGACAATCGGCATTATCCCTTCTACCTATGGCGGAAAGTTATCAACGCGCATTGGTCGTCGAAGTATCTTCTCGTTCCAGCATATATTTATTCATGGTTTTCCATCTTCAACATATTAGGGAAATCCAAGAGGAAAATATGGGTACTCGCATATTTCTTAGCCACTGCTGCGGTTCTTGTTCCTGCTCCATTAATTGAATTCAGATACTTCACTACACCATTTTTCTTCTTGATACTCAATTCTGAGTTGAATGGTAGACTAAATTGGCTTCTGATTGCACTTGTTTACATAGCTTTGGATGCCTTCACAATGATCATGTTCCTGTTTCGCCCATTTCACTGGGAAAATGAAACTGGAAAGCAGAGGTATGTCAATTCCTGGTCAGTGCGACTACGTTCATCAAATTCGTTGCCAGTGCCGCAGTTGGTTAGTTTTACACACTTAATTTCATCCATTCTCCATGTGTTCGAGTACAATTTGCTGCTCGGATTCTTAATTGTCGTGCCCATTCCACCTCCAATGGCCATCTCTGGGTTTCGAGCTCTTCTAAGGTGGAGCAAATGGTCGAAGAAAGAGTGGGCGATTGCAGTCATCTCTGTCGCTTTCATCGTTTCTGTTTTTTCTTTCCTCTCCGACTCTTGGCATGCTGAAGACGCTGGCATCAACCACACTTTCGATCTCAATCCCGCCAATGACCCTGATTTGGTTGACCTATCTCTGCTACAGAATGCCAAAGCAAAAGGCGCTCTATGTCTTGATGGGAGTTTGCCTGGATACCATTTTCAGAAGGGGTTCGGATCTGGTAATAGGAACTGGGTGCTTCACATTGAGGGTGGAGGTTGGTGCAATTCGGTCTCGTCCTGTTCTTCGCGTAAAATGACCCCGTTAGGTTCGTCAGCCTACATGGATCCCCGTGTTCGTTTCTCTGGAATTTTAAGTAGTGATGCATCCAAAAATCCTGATTTCTATAATTGGAACAAGATCAAGATACGTTACTGTGATGGAGCCTCGTTTGCAAGCCATCCTGAGGGTGAAACAAAGAATGGGAATAGACTTTATTTCAGAGGACAGCTCATCTGGGAAGCGCTTATGGATGAACTCTTATCGGTTGGCTTGTCAAACGCAAGGCAGGCTCTTCTCTCAGGGTGCTCTGCTGGGGGATTGGCTACCCTTATACATTGTGATGACTTCAGAGAGCTTTTGCCGAAGGATGCAACTGTCAAGTGTCTAGCTGATGCTGGATTTTTCCTTGACGAGAAAGATGTTTGGGGAAATCATACTATGAGATCTTTCTATCACGATGTTTTCAACCTTCAGAACACTGCTAAAAGCTTACCCAAGGATTGTACAGCAACAGAGGAGCCATCTAAGTGTCTCTTTCCTCAAGAAATTATCAAACATATCAGCACCCCGTTGTTTCTTGTCAACCCAGCTTATGATTTTTGGCAGATACAAAATGTCTTGGTACCAAATCCGTTACATCCTGCTGGCGCTTGGGAGAAATGTAGGCTTAATATTCATAAATGTGATCATGCTCAGCTTGAAATTCTTCAAGGGTTCCGAGACTCTTTGCTGAAGGCACTGAAGGACTTCAAGCACAGCAAGGAAGGAGGGCTTTTCATAAATTCTTGCTTCATCCATTGCCAAACATGGATGTCTGAGACATGGCATTCCCCCAATTCTCCAAGGATAAATAAGAAGACTATAGCAGAGGCCGTTGGTGATTGGTACTTCAAACGAAATTCAGCAGCCTTTTCTGTTGTCACTCATTTGCAATGTCTTTGCTTGGGGAAAACATCTTTATCCATGTCGAAGGCTGGTCTCCAGAAGCAGAAACAGAGGTCCAATTCCACCCAAGGATTTCTTCTTCTGACTGATCAAAACAAGGTAGGAGGGAAGTCAAGACTTCTAGAGAAGAAACTTCTTCTGAAGTATGCAAAACAAAATTGTTGA 3108 42.6 MGRIVVAAIVSLWVVPISILVNRIVPDPYMDEIFHIPQAQKYCSGNFRSWDPMITTPPGLYYLSLAHVASLFPATIFTQAAPSFSEACSVRILRSTNGIFAVLCSVLVYEIISHLRPNLDDKKATTYAVILSLYPLHWFFTFLYYTDVASLTAVLAMYLACLKKNYWSSALFGIFAVVIRQTNIIWMLFVACSAVIDTTLTCHDDNIQMHENDVMVEESNPLNAKGSPISRANLRKRKFITTKDAGKQFRHSTRSSLIDQKSGLLDEIRALILTVWHMKFKLLVSFCPFVIVLMAFVAFVRWNGSIVLGAKEAHAVSLHFAQIMYFGLFSALVMAPMHCNPSQVIDVFHSLWKGRPLSFLQVFIALLAGFIFVHYFSIAHPYLLADNRHYPFYLWRKVINAHWSSKYLLVPAYIYSWFSIFNILGKSKRKIWVLAYFLATAAVLVPAPLIEFRYFTTPFFFLILNSELNGRLNWLLIALVYIALDAFTMIMFLFRPFHWENETGKQRYVNSWSVRLRSSNSLPVPQLVSFTHLISSILHVFEYNLLLGFLIVVPIPPPMAISGFRALLRWSKWSKKEWAIAVISVAFIVSVFSFLSDSWHAEDAGINHTFDLNPANDPDLVDLSLLQNAKAKGALCLDGSLPGYHFQKGFGSGNRNWVLHIEGGGWCNSVSSCSSRKMTPLGSSAYMDPRVRFSGILSSDASKNPDFYNWNKIKIRYCDGASFASHPEGETKNGNRLYFRGQLIWEALMDELLSVGLSNARQALLSGCSAGGLATLIHCDDFRELLPKDATVKCLADAGFFLDEKDVWGNHTMRSFYHDVFNLQNTAKSLPKDCTATEEPSKCLFPQEIIKHISTPLFLVNPAYDFWQIQNVLVPNPLHPAGAWEKCRLNIHKCDHAQLEILQGFRDSLLKALKDFKHSKEGGLFINSCFIHCQTWMSETWHSPNSPRINKKTIAEAVGDWYFKRNSAAFSVVTHLQCLCLGKTSLSMSKAGLQKQKQRSNSTQGFLLLTDQNKVGGKSRLLEKKLLLKYAKQNC 1035
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 5244827 5258479 + CmoCh07G010380.1 Cmo07g01038 386346
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g01038 1035 Pfam DIE2/ALG10 family 25 463 IPR016900 GO:0006488|GO:0106073
Cmo07g01038 1035 Pfam Pectinacetylesterase 618 966 IPR004963 GO:0016787
Cmo07g01038 1035 PANTHER PECTIN ACETYLESTERASE 4 571 969 - -
Cmo07g01038 1035 PANTHER NOTUM-RELATED 571 969 IPR004963 GO:0016787
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g01038 Cmo-Chr7:5244827 Cmo11g01255 Cmo-Chr11:7951868 2.26E-133 dispersed
Cmo07g01038 Cmo-Chr7:5244827 Cmo16g00130 Cmo-Chr16:605501 3.59E-127 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g01038 K03850 - csv:101214003 887.1