Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g01074 ATGGCTGAAGAAGAAGTACAAGTGTTTGGCTTCCGGTCAGGCCCCTTCAGCCTCAGAGTGGAGTTGGCTCTCAAACTCAAAGCCGTGGATTACCAACACATTGAAGAAGATTTGCTCAACAACAAAAGTGATTTGCTTCTCAAATACAACCCAATCTACAAGAAGGTGCCTGTCCTTGTCCACAATGGCAACCCCATTTCGGAGTCACTCGTCATCCTTGAGTACATCGAACATAACTGGACGCACAATCCCATCTTCCCCGCACATCCCTATGATCGAGCTCTCGCCAGGTTTTGGGCCAAATACATCGATGACATGGTTGTGCCTGCCGTGCATAAAATTTCTCGAAGCATGGAAAAAGAGAGAGAGAAAGCCATAGAAGAAGCTCAGAAGACCTTGGAACCATTAGAGAATGAGCTTGAAAGCAAGAAGTTCTTCGGAGGAGAGGAAATTGGGTTGGTGGACATTGTAGGACTTATTTTGGCCGGGTGGATTCCTGCCATTGAAGAAGCTTTAGGATTTGAGCTTCTCATAACCCACAGGTTTCCAAACCTGAAAAAATGGACTGAAGAGTTCGTGAACCACCACGTGGCCAAGCAGGTTATGCCTCAAAAGGATGGGCTTGTTGCCTTTCTTAAAAATGTTGCGCTTAATCGAAAAAATTAA 666 45.5 MAEEEVQVFGFRSGPFSLRVELALKLKAVDYQHIEEDLLNNKSDLLLKYNPIYKKVPVLVHNGNPISESLVILEYIEHNWTHNPIFPAHPYDRALARFWAKYIDDMVVPAVHKISRSMEKEREKAIEEAQKTLEPLENELESKKFFGGEEIGLVDIVGLILAGWIPAIEEALGFELLITHRFPNLKKWTEEFVNHHVAKQVMPQKDGLVAFLKNVALNRKN 221
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5557747 5558664 - CmoCh07G010740.1 Cmo07g01074 386382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g01074 221 CDD GST_C_Tau 90 213 IPR045074 GO:0004364|GO:0006749
Cmo07g01074 221 SFLD Main.3: Omega- and Tau-like 1 215 IPR045073 -
Cmo07g01074 221 CDD GST_N_Tau 6 80 - -
Cmo07g01074 221 SUPERFAMILY Thioredoxin-like 6 108 IPR036249 -
Cmo07g01074 221 SFLD Glutathione Transferase (cytosolic) 1 215 IPR040079 -
Cmo07g01074 221 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Cmo07g01074 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 3 217 IPR045073 -
Cmo07g01074 221 Coils Coil 119 139 - -
Cmo07g01074 221 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 3 217 - -
Cmo07g01074 221 SUPERFAMILY GST C-terminal domain-like 79 214 IPR036282 -
Cmo07g01074 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 221 IPR010987 -
Cmo07g01074 221 Gene3D Glutaredoxin 1 85 - -
Cmo07g01074 221 Pfam Glutathione S-transferase, C-terminal domain 98 194 IPR004046 -
Cmo07g01074 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 84 IPR004045 -
Cmo07g01074 221 Gene3D - 86 220 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00394 Cmo-Chr3:4801084 Cmo07g01074 Cmo-Chr7:5557747 1.50E-98 dispersed
Cmo03g00395 Cmo-Chr3:4803152 Cmo07g01074 Cmo-Chr7:5557747 1.47E-93 dispersed
Cmo03g00404 Cmo-Chr3:4832367 Cmo07g01074 Cmo-Chr7:5557747 6.21E-88 dispersed
Cmo07g01074 Cmo-Chr7:5557747 Cmo14g02022 Cmo-Chr14:14807738 2.84E-12 dispersed
Cmo07g01072 Cmo-Chr7:5533132 Cmo07g01074 Cmo-Chr7:5557747 1.18E-73 proximal
Cmo07g01074 Cmo-Chr7:5557747 Cmo07g01075 Cmo-Chr7:5586762 3.02E-114 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g01074 K00799 - csv:101215228 324.324