Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g01093 ATGGCCGCCACTTCCGCCGCCACCTCCTCCTTCATCGGAACACGCCTCGCCGACGTGCGGTCAAGTTCCGGCCGAGTCCAAGCCCGATTCTCATTCGGCAAAAAGAAAAGCCCGGCGAAGAAATTGCCTTCGTCAAAGCAGATTCCCGACCGACCTCTATGGTTCCCCGGAGCCAAGGCGCCGGAATGGCTCGACGGAAGCTTGGTCGGCGACTACGGATTCGATCCGTTCGGATTGGGGAAACCAGCAGAGTATCTGCAATACGATTTGGACTCGTTGGATCAGAATCTGGCGAAGAATGTGGCTGGAGATCTAATAGGGACGAGATTTGAGAACTCCGAAGTAAAATCGACGCCGTTTCAACCGTACACGGAGGTTTTTGGGTTGCAGAGATTTCGTGAGTGCGAGCTGATCCATGGAAGATGGGCAATGCTAGCAACCCTCGGCGCTCTCACCGTTGAATGGCTCACCGGCGTCACTTGGCAAGACGCTGGAAAGGTAGAATTGGTGGAAGGGTCATCGTACCTCGGGCAGCCGCTTCCGTTCTCGCTCACGGCATTGATCTGGATCGAAGTTCTGGTGATCGGATACATCGAGTTTCAGAGGAACGCGGAGCTAGAGCCGGAGAAGAGATTGTACCCTGGAGGGAAGTTTTTCGACCCGCTGGGGTTGGCGGAGGATCCGGAGAAGAAAGCTGTTCTTCAACTGGCTGAGATCAAACACGCTCGCCTCGCCATGGTTGCCTTCCTTGGGTTCGCTGTTCAAGCTGCTGTGACGGGGAAAGGGCCGCTCAATAACTGGGCCACCCATCTCAGCGACCCCCTCCACACCACCATCATTGACAACTTCTCCTCTTCCTAA 861 55.63 MAATSAATSSFIGTRLADVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS 286
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5721158 5722729 + CmoCh07G010930.1 Cmo07g01093 386401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g01093 286 Gene3D Chlorophyll a/b binding protein domain 54 286 - -
Cmo07g01093 286 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 286 IPR001344 GO:0009765|GO:0016020
Cmo07g01093 286 SUPERFAMILY Chlorophyll a-b binding protein 48 284 - -
Cmo07g01093 286 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.2, CHLOROPLASTIC 1 286 - -
Cmo07g01093 286 MobiDBLite consensus disorder prediction 19 47 - -
Cmo07g01093 286 Pfam Chlorophyll A-B binding protein 60 256 IPR022796 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g01093 Cmo-Chr7:5721158 Cmo15g00458 Cmo-Chr15:2086325 1.32E-44 dispersed
Cmo03g00375 Cmo-Chr3:4670633 Cmo07g01093 Cmo-Chr7:5721158 2.91E-100 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g01093 K08915 - csv:101208740 537.724