Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g01125 ATGACAACAACCGTCTCGCACTCTCCCGATTATCGCCCCGAAATTTCAGTAATCCCGCCCACCCGCGACGGCCTGTCCTTCTGGCAGTTCATGATCGCCGGATCAATTGCAGGGTCTGTCGAGCACATGGCCATGTTTCCAGTGGACACACTCAAGACCCGAATCCAAGCCCTTGCCGGATCATCCACCCTCCGACAAGCACTCAGTTCAATTCTCAAATCGGAAGGTCCGGCCGGGCTCTACCGTGGAATCGGAGCAATGGGTCTCGGAGCAGGACCTGCACACGCCGTATACTTCTCTGTATACGAATTCTGCAAACAAAGATTTTCGATTGGGAATCCCAACAACCCATTAGCCCACGCCATTTCTGGAGTCTGTGCAACGGTGGCGAGCGACGCCGCGTTGACGCCGATGGATGTGGTGAAACAGAGACTGCAATTGAAGAGCAGTCCTTATAAGGGAGTGAGGGACTGTGCGAGGAGGATTCTGGTCGAGGAAGGAATTGGGGCGTTCTATGCTTCTTATTGGACTACTGTTTTGATGAATGCCCCGTACACGGCTGCCCATTTTGCCATTTATGAAGCTGTGAAAAGGGGTTTGAAGGAGGGCTCGCCGGGAAGCGAAGGCGGGGAGGGGTTGGTTGTCCATGCTACGGCTGGTGCGGCTGCTGGGTCTCTTGCTGCTGGTCTTACAACGCCATTAGACGTAGTGAAAACGCGGCTGCAGTGCCAGGGAGTGTGTGGGTGCGACAGATTTTCAAGCAGTTCAATAATATCTGTGGTTAGGCATGTGGTGAAGAAGGATGGGAAGAGCGGGTTGATGAGAGGGTGGATTCCAAGGATGCTGTTCCATGCGCCTGCTGCTGCCATTGCCTGGTCCACTTATGAAGCCTCAAAGACATTGTTCCAACACCTCCACAATTAG 924 53.68 MTTTVSHSPDYRPEISVIPPTRDGLSFWQFMIAGSIAGSVEHMAMFPVDTLKTRIQALAGSSTLRQALSSILKSEGPAGLYRGIGAMGLGAGPAHAVYFSVYEFCKQRFSIGNPNNPLAHAISGVCATVASDAALTPMDVVKQRLQLKSSPYKGVRDCARRILVEEGIGAFYASYWTTVLMNAPYTAAHFAIYEAVKRGLKEGSPGSEGGEGLVVHATAGAAAGSLAAGLTTPLDVVKTRLQCQGVCGCDRFSSSSIISVVRHVVKKDGKSGLMRGWIPRMLFHAPAAAIAWSTYEASKTLFQHLHN 307
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5926574 5927770 - CmoCh07G011250.1 Cmo07g01125 386433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g01125 307 SUPERFAMILY Mitochondrial carrier 24 296 IPR023395 -
Cmo07g01125 307 PRINTS Mitochondrial carrier protein signature 130 148 IPR002067 GO:0055085
Cmo07g01125 307 PRINTS Mitochondrial carrier protein signature 30 43 IPR002067 GO:0055085
Cmo07g01125 307 PRINTS Mitochondrial carrier protein signature 220 242 IPR002067 GO:0055085
Cmo07g01125 307 PRINTS Mitochondrial carrier protein signature 43 57 IPR002067 GO:0055085
Cmo07g01125 307 PRINTS Mitochondrial carrier protein signature 172 190 IPR002067 GO:0055085
Cmo07g01125 307 ProSiteProfiles Solute carrier (Solcar) repeat profile. 115 199 IPR018108 -
Cmo07g01125 307 PANTHER MITOFERRIN-1-RELATED 8 306 - -
Cmo07g01125 307 Pfam Mitochondrial carrier protein 213 304 IPR018108 -
Cmo07g01125 307 Pfam Mitochondrial carrier protein 25 109 IPR018108 -
Cmo07g01125 307 Pfam Mitochondrial carrier protein 115 202 IPR018108 -
Cmo07g01125 307 Gene3D Mitochondrial carrier domain 8 149 IPR023395 -
Cmo07g01125 307 ProSiteProfiles Solute carrier (Solcar) repeat profile. 211 301 IPR018108 -
Cmo07g01125 307 Gene3D Mitochondrial carrier domain 150 307 IPR023395 -
Cmo07g01125 307 ProSiteProfiles Solute carrier (Solcar) repeat profile. 25 108 IPR018108 -
Cmo07g01125 307 PANTHER MITOFERRIN-LIKE 8 306 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g00342 Cmo07g01125 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00725 Cmo-Chr2:4581054 Cmo07g01125 Cmo-Chr7:5926574 1.28E-141 dispersed
Cmo07g01125 Cmo-Chr7:5926574 Cmo20g00352 Cmo-Chr20:1733791 4.22E-151 dispersed
Cmo03g00342 Cmo-Chr3:4487298 Cmo07g01125 Cmo-Chr7:5926574 6.44E-166 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g01125 K15113 - csv:101210464 490.345