Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g01136 ATGGGAAGACGTGGTTCTTTTGTTATGTTTGTGGTTATTGTTTTGACATTGTTGTTCGCCATTGTTCCAATGTCTATGGCCCAGCTTCGACAAGATTTTTACGCTGATGTTTGTCCTAACGTTGAGAGCATAGTCCGAGATACTGTCACGAAGAAGTTCCGACAAACGTTTGTTACTGTTCCTGCCACCCTCCGCCTCTTCTTTCACGACTGTTTTGTTCAAGGATGTGATGCGTCGGTGATGATTGGTTCGGACGGAAGTAATACAGTGGAGAAGGATCATCCTGATAACCTTTCATTAGCAGGAGATGGATTTGATACTGTGATTAAAGCGAAAGCTGCTGTTGACGCTGTGCCAGAATGTAGAAATAAAGTGTCGTGTGCCGATATTCTCGTGATGGCTACTCGAGATGTCATTTCATTGGCTCGAGGGCCATCATATGCAGTGGAGCTAGGGAGAAAGGATGGGCTTGTTTCAAGGGCTTCAGATGTGGAAGGCAAATTGCCTAAGCCAAGCTTTAATCTCAATCAGCTCAATGCCATGTTTGCTGCCAATGGCCTTTCCCAGACTGACATGATTGCTCTCTCCGCTGCGCACACGGTCGGATTCTCCCACTGCAGCAAATTGGCAAACAGAATATACAATTTCAGCCGTACAAATCCAGTGGATCCAACGCTGAACCCAACCTATGCAAGCAGGCTTCAAGAGATGTGCCCAAGAGACGTGGATCCAAGGATAGCCATAAACATGGATCCAAACACCCCCACAAGGTTCGACAATATGTACTTCAAGAATCTGCAGCAAGGAATGGGCCTCTTCACTTCCGACCAGGTGCTCTTCAGTGACACAAGGTCGAGACCCACTGTCAAGGTTTGGGCTCATAGTGGACAAACCTTCTACACTGCCTTCGTTACTGCCATGACCAAGTTGGGTCGTGTCGGTGTCAAGACCGGATCCGATGGCAACATTCGCACTGACTGCGGTGCTTTCAACCCTTGA 999 47.65 MGRRGSFVMFVVIVLTLLFAIVPMSMAQLRQDFYADVCPNVESIVRDTVTKKFRQTFVTVPATLRLFFHDCFVQGCDASVMIGSDGSNTVEKDHPDNLSLAGDGFDTVIKAKAAVDAVPECRNKVSCADILVMATRDVISLARGPSYAVELGRKDGLVSRASDVEGKLPKPSFNLNQLNAMFAANGLSQTDMIALSAAHTVGFSHCSKLANRIYNFSRTNPVDPTLNPTYASRLQEMCPRDVDPRIAINMDPNTPTRFDNMYFKNLQQGMGLFTSDQVLFSDTRSRPTVKVWAHSGQTFYTAFVTAMTKLGRVGVKTGSDGNIRTDCGAFNP 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6028779 6030659 + CmoCh07G011360.1 Cmo07g01136 386444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g01136 332 Gene3D - 32 331 - -
Cmo07g01136 332 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Cmo07g01136 332 PANTHER - 9 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo07g01136 332 CDD secretory_peroxidase 28 330 IPR033905 GO:0004601|GO:0042744
Cmo07g01136 332 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo07g01136 332 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo07g01136 332 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo07g01136 332 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo07g01136 332 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo07g01136 332 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo07g01136 332 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo07g01136 332 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo07g01136 332 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo07g01136 332 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo07g01136 332 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo07g01136 332 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo07g01136 332 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo07g01136 332 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo07g01136 332 SUPERFAMILY Heme-dependent peroxidases 28 332 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo07g01136 332 Gene3D Peroxidase, domain 2 169 310 - -
Cmo07g01136 332 Pfam Peroxidase 45 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo07g01136 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Cmo07g01136 332 PANTHER PEROXIDASE 9 331 - -
Cmo07g01136 332 ProSiteProfiles Plant heme peroxidase family profile. 28 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00964 Cmo-Chr3:7235220 Cmo07g01136 Cmo-Chr7:6028779 0 dispersed
Cmo07g00671 Cmo-Chr7:3025898 Cmo07g01136 Cmo-Chr7:6028779 0 dispersed
Cmo07g01136 Cmo-Chr7:6028779 Cmo15g00076 Cmo-Chr15:397875 1.79E-142 dispersed
Cmo07g01136 Cmo-Chr7:6028779 Cmo20g01019 Cmo-Chr20:6692431 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g01136 K00430 - csv:101208254 586.645