Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g01148 ATGGCTACAAGACCAGTAGTTCCTCAACAAATCAGAGGTGAAGCGGCGATTGGAGGAGGAAAGCAGGGGAAGGGCGGGGCGGCGGTGGATGCAAGGAACCGCAGAGCATTGGGTGATATTGGGAATCTGGTAACTGTTCGAGGAATTGACGCAAAGGCTAATCGCCCTATTACAAGGAGTTTCTGTGCTCAGTTGCTTGCCAATGCTCAAGCGGCTGCAAAAGCTGAAAATAATATGAAACAAGTGCCTGTTAAAGTAGATGGGGCTGCTCCCATTCTTGATGGTGGTGTTGTGGCCGTTAAGAAACCAGGAGCTCCCAAGGCTGCAACGAAGAAAGTTGTTTCCAAACCGAAAGCGGAGGTGATCGAGATAAGCCCGGATAAGGTCGAACAAGATCGGGGCAAGGAAGTGAAATGTGCTAACAAGAAAAAGGAAGAAGGGGTCTCAAAGAAGAAGGCGCAGACTCTCACCGCAGTCATGACGGCTAGAAGCAAGGCTGCTTGTGGTGTAACCAAGAAACCAAAGGAACAGATAATTGACATTGACGCAGCAGATGTTGGAAATGAGTTGGCAGAAGTGGAATATGTTGAGGACATTTATAAGTTCTATAAGGAAGTTGAGAATGAGAGTAGGCCTCATGACTATATGGATTCACAACCGGAGATAAACACTTCAATGAGAGCAATATTGGTGGATTGGTTAGTTGATGTCCACAACAAGTTCGAGCTTTCCCCCGAAACATTCTACCTCACCATCAACATAATTGATCGCTTCCTTGCGAGGAAGGCAGTTCCAAGAAGGGAATTGCAGTTGTTGGGTATTGGGGCAATGCTCATAGCCTCCAAATACGAGGAGATCTGGGCGCCAGAGGTAAATGACTTTGTGTGCCTTTCAGATAGAGCATACACGAATGAACAGATACTAACGATGGAGAAAAGGATACTTGGGAAGCTGGAATGGACCATGACCGTGCCAACTCCATATGTTTTCCTCGCTCGGTTCATCAAGGCATCGAAGGACTCCGATCATGAGATGGAAAATCTGGTATATTTTCTGGCAGAACTTGGTATAATGCATTACAACACCTCAATAATGTACAGCCCATCAATGATTGCCGCCTCGGCAGTCTATGCCGCTCGATGCACGCTGAAGAAAAGCCCTGGTTGGGATGAGACCCTCAAACTGCACACTGGCTTCACAGAGCCTCAACTAATTGATTGTGCCAAGCATTTGGTGGGATTCCATGGAGCAGCAAGCAAGAACAAGCTTCAAGTAATATACAGAAAGTACTCCAGCTCCGAAAGGGGAGCGGTAGCATTACTTCAGCCACCCAAAGCTCTCTTGTTGACTCCTAATGGTCATTGA 1365 47.03 MATRPVVPQQIRGEAAIGGGKQGKGGAAVDARNRRALGDIGNLVTVRGIDAKANRPITRSFCAQLLANAQAAAKAENNMKQVPVKVDGAAPILDGGVVAVKKPGAPKAATKKVVSKPKAEVIEISPDKVEQDRGKEVKCANKKKEEGVSKKKAQTLTAVMTARSKAACGVTKKPKEQIIDIDAADVGNELAEVEYVEDIYKFYKEVENESRPHDYMDSQPEINTSMRAILVDWLVDVHNKFELSPETFYLTINIIDRFLARKAVPRRELQLLGIGAMLIASKYEEIWAPEVNDFVCLSDRAYTNEQILTMEKRILGKLEWTMTVPTPYVFLARFIKASKDSDHEMENLVYFLAELGIMHYNTSIMYSPSMIAASAVYAARCTLKKSPGWDETLKLHTGFTEPQLIDCAKHLVGFHGAASKNKLQVIYRKYSSSERGAVALLQPPKALLLTPNGH 454
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 6157067 6159485 - CmoCh07G011480.1 Cmo07g01148 386456
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g01148 454 PANTHER CYCLINS 21 449 IPR039361 -
Cmo07g01148 454 SUPERFAMILY Cyclin-like 324 445 IPR036915 -
Cmo07g01148 454 SMART cyclin_7 329 413 IPR013763 -
Cmo07g01148 454 SMART cyclin_7 232 316 IPR013763 -
Cmo07g01148 454 CDD CYCLIN 323 412 IPR013763 -
Cmo07g01148 454 Gene3D - 212 323 - -
Cmo07g01148 454 ProSitePatterns Cyclins signature. 227 258 IPR006671 -
Cmo07g01148 454 Pfam Cyclin, C-terminal domain 325 443 IPR004367 -
Cmo07g01148 454 SUPERFAMILY Cyclin-like 187 322 IPR036915 -
Cmo07g01148 454 PANTHER G2/MITOTIC-SPECIFIC CYCLIN S13-6 21 449 - -
Cmo07g01148 454 MobiDBLite consensus disorder prediction 1 27 - -
Cmo07g01148 454 Pfam Cyclin, N-terminal domain 198 322 IPR006671 -
Cmo07g01148 454 CDD CYCLIN 226 315 IPR013763 -
Cmo07g01148 454 SMART Cyclin_C_2 325 444 IPR004367 -
Cmo07g01148 454 PIRSF Cyclin_A_B_D_E 1 453 IPR039361 -
Cmo07g01148 454 Gene3D - 198 439 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01333 Cmo-Chr2:7911851 Cmo07g01148 Cmo-Chr7:6157067 5.96E-135 dispersed
Cmo03g00655 Cmo-Chr3:5920759 Cmo07g01148 Cmo-Chr7:6157067 1.18E-82 dispersed
Cmo07g00380 Cmo-Chr7:1754220 Cmo07g01148 Cmo-Chr7:6157067 1.04E-84 dispersed
Cmo07g01148 Cmo-Chr7:6157067 Cmo07g01150 Cmo-Chr7:6175157 0 dispersed
Cmo07g01148 Cmo-Chr7:6157067 Cmo07g01149 Cmo-Chr7:6170474 0 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g01148 K21777 - csv:101217210 717.998