Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g01150 ATGGCTTCAAGACCAGTAGTTCCCCAACAAATCAGAGGTGATGAAGCCATCGGCGGAGGAAAGCAGGTGAAGGGCGGGGCGGCGGTGGATGCGAGGAACCGCAGAGCATTGGGTGATATTGGGAATCTGGTAACTGTTCGAGGAAATGACGCAAAGGCAAATCGCCCTGTTACAAGGAGTTTCTGTGCTCAGTTGCTTGCCAATGCCCAAGCGGCTGCAAAAGCTGAAAATAATAAGAAATTAGTGCCTGTCAGTGTAGATGGGGCTGCTCCCATTCTTAATGATGGTATTGTGGCTGTTCGGAAGCCAAGAGCACCCAAGGCAGCACCCAAGAAAGTTGTTTCCAAACCAAAAGCGGAGGTGATCGAGATAAGCCCGGATACGGTCGAAAAAGATCGGGGCAAGGAAGTGAAATGTGGTAACAAGAAAAAGGAAGGAGAAGGGGTCTCAAAGAAGAAGGCACAGACTCTCACCGCAGTCATGACGGCTAGAAGCAAGGCTGCTTGTGGAGTAACCAAGAAACCAAAGGAACAGACAATTGACATTGACGCAGCAGATGTTGGAAATGAGTTGGCAGAAGTGGAATATGTTGAGGACATTTATAAGTTCTATAAGGAAGTTGAGAATGAGAGTAGGCCTCATGACTATATGGACTCGCAACCGGAGATAAACGCTTCAATGAGAGCAATATTGGTGGATTGGTTAGTTGATGTCCACAACAAGTTCGAGCTCTCCCCCGAAACATTCTACCTCACCATCAACATAATTGATCGCTTCCTTGCGAGGAAGGCAGTTCCAAGAAGGGAATTGCAGTTGTTGGGTATTGGGGCAATGCTCATAGCCTCCAAATACGAGGAGATCTGGGCGCCAGAGGTAAATGACTTTGTGTGCCTTTCAGATAGAGCATACACGAATGAACAGATACTAATGATGGAGAAAAGGATACTTGGGAAGCTGGAATGGACCATGACCGTGCCTACTCCATATGTTTTCCTCGCTCGGTTCATCAAGGCATCGAAGGACTCCGATCACGAGATGGAAAATCTGGTATATTTTCTGGCAGAACTTGGTATAATGCATTACAACACCTCAATAATGTACAGCCCATCAATGATTGCCGCCTCGGCAGTCTATGCCGCTCGATGCACGCTGAAGAAAAGCCCTGGTTGGGATGAGACCCTCAAACTGCACACTGGCTTCACAGAGCCTCAACTAATTGATTGTGCCAAGCATTTGGTGGGATTCCATGGAGCAGCAAGCAAGAACAAGCTTCAAGTAATATACAGAAAGTACTCCAGCTCCGAGAGGGGAGCGGTAGCATTACTTCAGCCACCCAAAGCGCTCTTGGTGGTGCCTCCTAATGGTCATTGA 1371 47.85 MASRPVVPQQIRGDEAIGGGKQVKGGAAVDARNRRALGDIGNLVTVRGNDAKANRPVTRSFCAQLLANAQAAAKAENNKKLVPVSVDGAAPILNDGIVAVRKPRAPKAAPKKVVSKPKAEVIEISPDTVEKDRGKEVKCGNKKKEGEGVSKKKAQTLTAVMTARSKAACGVTKKPKEQTIDIDAADVGNELAEVEYVEDIYKFYKEVENESRPHDYMDSQPEINASMRAILVDWLVDVHNKFELSPETFYLTINIIDRFLARKAVPRRELQLLGIGAMLIASKYEEIWAPEVNDFVCLSDRAYTNEQILMMEKRILGKLEWTMTVPTPYVFLARFIKASKDSDHEMENLVYFLAELGIMHYNTSIMYSPSMIAASAVYAARCTLKKSPGWDETLKLHTGFTEPQLIDCAKHLVGFHGAASKNKLQVIYRKYSSSERGAVALLQPPKALLVVPPNGH 456
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6175157 6177468 + CmoCh07G011500.1 Cmo07g01150 386458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g01150 456 CDD CYCLIN 324 413 IPR013763 -
Cmo07g01150 456 SMART cyclin_7 330 414 IPR013763 -
Cmo07g01150 456 SMART cyclin_7 233 317 IPR013763 -
Cmo07g01150 456 CDD CYCLIN 227 316 IPR013763 -
Cmo07g01150 456 Gene3D - 213 324 - -
Cmo07g01150 456 ProSitePatterns Cyclins signature. 228 259 IPR006671 -
Cmo07g01150 456 PANTHER G2/MITOTIC-SPECIFIC CYCLIN S13-6 21 450 - -
Cmo07g01150 456 Pfam Cyclin, C-terminal domain 326 444 IPR004367 -
Cmo07g01150 456 Gene3D - 199 440 - -
Cmo07g01150 456 SMART Cyclin_C_2 326 445 IPR004367 -
Cmo07g01150 456 PIRSF Cyclin_A_B_D_E 1 454 IPR039361 -
Cmo07g01150 456 SUPERFAMILY Cyclin-like 325 446 IPR036915 -
Cmo07g01150 456 MobiDBLite consensus disorder prediction 1 22 - -
Cmo07g01150 456 Pfam Cyclin, N-terminal domain 199 323 IPR006671 -
Cmo07g01150 456 SUPERFAMILY Cyclin-like 188 323 IPR036915 -
Cmo07g01150 456 PANTHER CYCLINS 21 450 IPR039361 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g01148 Cmo-Chr7:6157067 Cmo07g01150 Cmo-Chr7:6175157 0 dispersed
Cmo07g01150 Cmo-Chr7:6175157 Cmo19g01144 Cmo-Chr19:9635668 6.24E-73 dispersed
Cmo07g01149 Cmo-Chr7:6170474 Cmo07g01150 Cmo-Chr7:6175157 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g01150 K21777 - csv:101217210 715.301