Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g01153 ATGGGGAAAAACGACGGAGAACACCCACCGCCCTCCGCCGTCGGTTCCGCTCCGTCCCAAGGCCGATGCTGTTCTGGGTGTGTTTCAATTCGAAGGCTCATTGGCTTCAGATGCATCTTCATTCTGCTTTTGTCCGTTGCCTTGTTCGTTTCTGCTGTTTTTTGGCTGCCCCCTTTTCTCCATTATTCAGATCAGAAGGATCTGGGTCTTAATCCCTCGTATCGAGGTCATGATATAGTAGCAACGTTCGTTGTTGAGAGACCAGTTTCTTTGCTGCAAGACAATATCGAGCGACTCCGGACCGACATTTTTGAAGAGTTCCCTATACCTTCTATCAAAGTGGATATACTATCTTTAAACTCGTTATCAGGATCAAACCGTACAAAAGTTGTATTCGGCATTGATCCAGATACTGATGATCCCGAAATCCCGTCAACTTATCTGAGTTTAATCAGGTCGACCTGTGCAAGTGTAGTAACAAATCAGTCGTTCCTCCGCATTACGAAATCCATGTTTGGGGAGGCGTTTTCGTTTGAAGTACTGAAATTCCCCGGAGGAATAACGATAATCCCGCCTCAGAGTGCATTTCTTTTGCAGAAAGTGCAAATTCTTTTCAACTTTACATTGAACTTCTCTATTCATCAGATTCAAGTACATTTCAGTGAACTGACAAGCCAATTGGATGCGGGATTACGACTAGCTCCCTACGAGATTTTGTATATTAAACTGTGGAATGCGGAAGGGTCGACTGTGACTGCCCCGACGATTGTCCAGTCATCTGTTCTTCTAGAAGTTGGAAATACGCCATCGATGCAACGGTTGAAGCAGCTAGCTCAGACCATCTCTGTTTCTAATTCTAGCAACCTCGGCCTGAATAATACCGAGTTTGGAAAAGTGAAGCAAGTTCGCCTTTCCTCGATTCTTAAACACTCGCTCAATGGTATGGATGGGAAAGGCCCCATAAGGTCACCTTCTCCAGCTCCTACACCACAGCCCCATAACTTCCATCATCCACCATCTCACCACCATCACCACCATCATGCTCCTCTAACTCCTGTAATTTCACCTGCCCCTGCGCCTGAGACCGGTGCACCGGAATATGGGTTGTCTGCCCCTAAAAGTGCAGCATCGCCTAAGCGAAGTTACGAGGCAAAGCCTCCTGGTTGTCAATATAAGAGGAAATCTGGTAGGAAAGAGGGAAAGCAACCTCATTTATCCCCGCTTGCGTCGCCCAGCATATCTCCTGTTCATTCTGCTGCATCGCCATCACAACAACATCACGTCTCTCCAACTCAGGCATCGACTCCATTGCCGAGTGTCATTTACGCTCATGTTCAACCACCATCGAAAAGTGACTCCAACCACCCCGAAAAATCCACGACGAGTCCATCCATTGTACCATCTCCATCTCCATCTCCATCTCCATCTCCATCTAGCGCACATCATTGGTGTATGATTACTCGGTGGGGATTCACACTGTCTCTAATTGTCGCATTCTACATGTAA 1506 46.88 MGKNDGEHPPPSAVGSAPSQGRCCSGCVSIRRLIGFRCIFILLLSVALFVSAVFWLPPFLHYSDQKDLGLNPSYRGHDIVATFVVERPVSLLQDNIERLRTDIFEEFPIPSIKVDILSLNSLSGSNRTKVVFGIDPDTDDPEIPSTYLSLIRSTCASVVTNQSFLRITKSMFGEAFSFEVLKFPGGITIIPPQSAFLLQKVQILFNFTLNFSIHQIQVHFSELTSQLDAGLRLAPYEILYIKLWNAEGSTVTAPTIVQSSVLLEVGNTPSMQRLKQLAQTISVSNSSNLGLNNTEFGKVKQVRLSSILKHSLNGMDGKGPIRSPSPAPTPQPHNFHHPPSHHHHHHHAPLTPVISPAPAPETGAPEYGLSAPKSAASPKRSYEAKPPGCQYKRKSGRKEGKQPHLSPLASPSISPVHSAASPSQQHHVSPTQASTPLPSVIYAHVQPPSKSDSNHPEKSTTSPSIVPSPSPSPSPSPSSAHHWCMITRWGFTLSLIVAFYM 501
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6194540 6198640 - CmoCh07G011530.1 Cmo07g01153 386461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g01153 501 MobiDBLite consensus disorder prediction 407 439 - -
Cmo07g01153 501 PANTHER F20B24.21 19 497 - -
Cmo07g01153 501 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 19 497 - -
Cmo07g01153 501 MobiDBLite consensus disorder prediction 311 479 - -
Cmo07g01153 501 MobiDBLite consensus disorder prediction 1 21 - -
Cmo07g01153 501 MobiDBLite consensus disorder prediction 446 465 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo07g01153 Cmo14g00512 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g01153 Cmo-Chr7:6194540 Cmo16g00403 Cmo-Chr16:1851860 1.78E-53 dispersed
Cmo14g00512 Cmo-Chr14:2530231 Cmo07g01153 Cmo-Chr7:6194540 8.26E-125 transposed
Cmo03g00190 Cmo-Chr3:3224496 Cmo07g01153 Cmo-Chr7:6194540 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g01153 - - bhj:120073837 749.584