Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g01169 ATGGACTTATTACAGTCTTTGGATCCTCAAATCCTTCTGGGTTTGGCTGTGGCTGTTTTAGCTCTTGCCTTTGGTGCTCTCTATTTGTTATCCTCGTCCAAGAAAACCAAATCCGGAGGTTGCTTGGATCCAGAGAATTTCAAGGAGTTTAAACTCATCAAGCGTGCGCAGCTGAGCCATAATGTGGCGAAGTTTACATTTACACTCCCAAGTTCTACTTCAGTTTTGGGCCTTCCCATTGGACAACATATAAGTTGCAGGGGCAAGGATGGTCAAGGTGAAGATGTTATCAAACCTTATACACCTATTACTTTGGATTCTGATGTCGGATATTTTGAATTAGTCATAAAGATGTATCCCCAAGGAAGGATGTCACACCATTTCCGACAGATGCGTGTCGGTGATTTTCTGTCTGTGAAAGGGCCCAAGGGGCGATTCAGGTATCAACCAGGCGAGGTCAGAGCATTTGGGATGCTCGCTGGAGGCTCTGGCATTACTCCTATGTATCAAGTTGCTCGAGCCATATTAGAAAATCCAAATGACAAGACGAAGGTACATCTCATTTATGCCAACGTCACCTACGAGGACATTCTTTTGAAGGAGGAGTTGGATCTTCTTGCCTCAAGGTACCCAGATATCTTCAAGCTCTATTATGTTTTAAACCAGCCTCCTGAATCGTGGGACGGCGGTGTTGGATTCGTGACGAAGGAGATGATTCAAACCCATTGCCCTGCTCCTGCTTCTGATGTTCGGATTTTAAGATGTGGGCCACCACCAATGAACAAGGCTATGGCTGCTCATCTTGAAGCTCTTGGATACGCACCAGAGATGCTGTTCATGTTCTGA 846 45.39 MDLLQSLDPQILLGLAVAVLALAFGALYLLSSSKKTKSGGCLDPENFKEFKLIKRAQLSHNVAKFTFTLPSSTSVLGLPIGQHISCRGKDGQGEDVIKPYTPITLDSDVGYFELVIKMYPQGRMSHHFRQMRVGDFLSVKGPKGRFRYQPGEVRAFGMLAGGSGITPMYQVARAILENPNDKTKVHLIYANVTYEDILLKEELDLLASRYPDIFKLYYVLNQPPESWDGGVGFVTKEMIQTHCPAPASDVRILRCGPPPMNKAMAAHLEALGYAPEMLFMF 281
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6270399 6274384 - CmoCh07G011690.1 Cmo07g01169 386477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g01169 281 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 137 278 IPR039261 -
Cmo07g01169 281 Pfam Oxidoreductase FAD-binding domain 50 148 IPR008333 -
Cmo07g01169 281 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 281 IPR001834 GO:0016491
Cmo07g01169 281 Gene3D Translation factors 40 139 - -
Cmo07g01169 281 PRINTS Cytochrome B5 reductase signature 76 87 - -
Cmo07g01169 281 PRINTS Cytochrome B5 reductase signature 98 105 - -
Cmo07g01169 281 PRINTS Cytochrome B5 reductase signature 134 148 - -
Cmo07g01169 281 PRINTS Cytochrome B5 reductase signature 157 176 - -
Cmo07g01169 281 PRINTS Cytochrome B5 reductase signature 195 206 - -
Cmo07g01169 281 PRINTS Cytochrome B5 reductase signature 251 259 - -
Cmo07g01169 281 CDD cyt_b5_reduct_like 50 281 - -
Cmo07g01169 281 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 45 149 IPR017927 GO:0016491
Cmo07g01169 281 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 281 - -
Cmo07g01169 281 SUPERFAMILY Riboflavin synthase domain-like 42 150 IPR017938 -
Cmo07g01169 281 Gene3D - 140 281 IPR039261 -
Cmo07g01169 281 Pfam Oxidoreductase NAD-binding domain 158 264 IPR001433 GO:0016491
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g00203 Cmo07g01169 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g01321 Cmo-Chr5:10233798 Cmo07g01169 Cmo-Chr7:6270399 8.05E-69 dispersed
Cmo07g01169 Cmo-Chr7:6270399 Cmo12g01247 Cmo-Chr12:11056880 1.13E-64 dispersed
Cmo06g00047 Cmo-Chr6:299972 Cmo07g01169 Cmo-Chr7:6270399 6.24E-167 transposed
Cmo20g00011 Cmo-Chr20:114784 Cmo07g01169 Cmo-Chr7:6270399 9.60E-132 transposed
Cmo03g00203 Cmo-Chr3:3329411 Cmo07g01169 Cmo-Chr7:6270399 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g01169 K00326 - csv:101212569 496.123