Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g01221 ATGATTGCTGCAATCAAGGCGGCGATCGGCGATGCCGTTCTTACTTCCATGTGGATTTTCTGTGCTTCGTCTCTTGGGGTTCTTACCTCCGTCCTGTACTCGGCCGCCGGCGTTTATGGCCTTCCGCTTCATCCGCTTCTCATCACTACTACTCTGGTCTTCCTTCTCGTTTTCATTTTCAATATAATTGGGGCTTTTTTGGGTGGCGCTAGCTTTAATCCAACTGCCACTGCCGCTTTCTATGCCGCCGGTGTTGGTCCGACCTCTCTCTTCGCCATGGCTCTCCGTTTCCCTGCTCAGGCAGCTGGTGCGGTTGCTGGTGCTCTGGCGATCAAGGAGGTGATGCCTATTCAATACAAGCACATGCTTGGTGGGCCTTCTCTGAAAGTTGACATTCATACTGGAGCCACAGCTGAAGGAGTTTTGACCTTTATAATCAGTTTTGCTGTTCTTCTAATTGTTCTCAGGGGTCCCTCCAGCCCAGTAATCAAGACATGGTTGCTGGCAATGGCCACTGTAGCTTTAATCGTTGCTGGTTCTAGTTACACAGGACCTTCCATGAATCCTGCAAATGCGTTTGGGTGGGCGTATATGAACAACAAACACGATACATGGGAGCAGTTGTACGTGTACTGGATCGCCCCGTTCATTGGAGCCATTTCGGCTGCTTGGCTTTTCAGAATCATCTTCCCACCACCAGCCCCAGCCCCAGCCTCAGCTAAGAAGAAGAAGAAAGCTTGA 741 50.61 MIAAIKAAIGDAVLTSMWIFCASSLGVLTSVLYSAAGVYGLPLHPLLITTTLVFLLVFIFNIIGAFLGGASFNPTATAAFYAAGVGPTSLFAMALRFPAQAAGAVAGALAIKEVMPIQYKHMLGGPSLKVDIHTGATAEGVLTFIISFAVLLIVLRGPSSPVIKTWLLAMATVALIVAGSSYTGPSMNPANAFGWAYMNNKHDTWEQLYVYWIAPFIGAISAAWLFRIIFPPPAPAPASAKKKKKA 246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6647349 6652187 + CmoCh07G012210.1 Cmo07g01221 386529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g01221 246 Pfam Major intrinsic protein 4 226 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo07g01221 246 PANTHER AQUAPORIN SIP1-1 3 244 - -
Cmo07g01221 246 SUPERFAMILY Aquaporin-like 5 243 IPR023271 -
Cmo07g01221 246 Gene3D Glycerol uptake facilitator protein. 2 237 IPR023271 -
Cmo07g01221 246 PANTHER AQUAPORIN SIP1-1 3 244 IPR044222 GO:0015250
Cmo07g01221 246 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo07g01221 246 PRINTS Major intrinsic protein family signature 53 77 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo07g01221 246 PRINTS Major intrinsic protein family signature 92 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo07g01221 246 PRINTS Major intrinsic protein family signature 138 156 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo07g01221 246 PRINTS Major intrinsic protein family signature 169 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo07g01221 246 PRINTS Major intrinsic protein family signature 209 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g00036 Cmo07g01221 CCT
Cmo03g00263 Cmo07g01221 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g01221 Cmo-Chr7:6647349 Cmo14g00487 Cmo-Chr14:2417509 1.13E-34 dispersed
Cmo03g00263 Cmo-Chr3:3918355 Cmo07g01221 Cmo-Chr7:6647349 1.93E-140 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g01221 K09875 - csv:101220534 409.453