Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g01222 ATGCATAAGCGTCCCGGTAAGCAACAGTCGGAATCGCTGTCGAATAGGATCTACGAATACAGAGGGGTGTTATTGTTCACGTCTCTTTCGCTTTTCCTAATCGCCTTTGTTCTCTATTTCATGCCGGGCCGTGAAAATTACTCGTTCAACCACCGCAAGGTTTACCCTGATCACAGGTCGTCTTCTTCTTCTTCTAAATCCACTTATGCTGTTATTTTTGATGCTGGTAGCTCTGGGAGTCGCGTCCATGTCTTTTGCTTCGATCAAAATCTCGATCTCCTCCCCGTTGGCAAGGATATCGAACTTTTTGAACAACTTAATCCAGGATTGAGTGCATATGCTGACAACCCCAAGAATGCTGCAGCTTCTCTAATTTCCCTTTTGGAAAAAGCGGAAAATGTGGTTCCTAAAGGGCTGCGGTCAATGGCCCCTGTTAGAGTTGGGGCAACTGCAGGCTTGAGGGCTCTGAAGGGGGATACATCTGACAAAATTTTGCAGGCGGTTAGGGATCTCCTGAGAGACAAAAGTGACCTCAAGTTGGAGGACAATGCTGTGTCTGTAATTGATGGAACTCAAGAAGGTTCTTACCTTTGGGTGACATTAAACTATCTGCTAGGGAACTTGGGCAAGAAATATTCGGATACAGTTGGAGTTGTAGATCTCGGCGGAGGATCTGTTCAAATGGCATATGCTATCTCCGAAACAGATGCTGCTCGATTATCAGAAGCAGAGAGTGTATACATAAAAAAAATGTATCTGAAGGGAGCAACTTATTATCTCTATGTTCACAGTTATTTGCATTATGGATTACTAGCTGCTCGAGCCGAGGTTTTGAGTGTCTCTAAAAATTCTAGCAACGATTGCATCCTATCTGGATTCGAAGGAGCATACCAATACGGGGGAAAGGACTATAAAGCATCAGCCTCTTCATCAGGCTCCAGCTTTAATAGATGCAAGAGGACAGTCGTGGAGGCTCTCAAGGTTAATGAATCAACGTGTACTCACGAGCAGTGCACTTTCGGTGGAGTTTGGAACGGCGGAGGAGGCGACGGGCAGAAGAATCTCTACGTTGCTTCATTTTTCTTCGACAGGGCTGCTGAGGCTGGTTTTGCTGACCCCAACAAGCCATTTGCTGAAGTTCGTCCTGTAGACTTCCGTGATGCAGCGAGGCAGGCATGCCAAATCAAACTCGAGGATGCTGCTACATATCCCAAGGTCAAGAAGGATAACCTTCCGTACTTGTGTATGGATCTTGTGTATCAATACGCACTACTTGTAGATGGATTAGGCCTAGATCCTTGGCAAAAGATCACATTGGTGAAGAAGGTTAAATACCACAACTCCTTGGTTGAAGCAGCCTGGCCTCTAGGCAGCGCCATTGAAGCTGTATCGTCGTTAGCCTAA 1404 45.94 MHKRPGKQQSESLSNRIYEYRGVLLFTSLSLFLIAFVLYFMPGRENYSFNHRKVYPDHRSSSSSSKSTYAVIFDAGSSGSRVHVFCFDQNLDLLPVGKDIELFEQLNPGLSAYADNPKNAAASLISLLEKAENVVPKGLRSMAPVRVGATAGLRALKGDTSDKILQAVRDLLRDKSDLKLEDNAVSVIDGTQEGSYLWVTLNYLLGNLGKKYSDTVGVVDLGGGSVQMAYAISETDAARLSEAESVYIKKMYLKGATYYLYVHSYLHYGLLAARAEVLSVSKNSSNDCILSGFEGAYQYGGKDYKASASSSGSSFNRCKRTVVEALKVNESTCTHEQCTFGGVWNGGGGDGQKNLYVASFFFDRAAEAGFADPNKPFAEVRPVDFRDAARQACQIKLEDAATYPKVKKDNLPYLCMDLVYQYALLVDGLGLDPWQKITLVKKVKYHNSLVEAAWPLGSAIEAVSSLA 467
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6653630 6659989 + CmoCh07G012220.1 Cmo07g01222 386530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g01222 467 Gene3D - 69 460 - -
Cmo07g01222 467 CDD NBD_sugar-kinase_HSP70_actin 71 230 - -
Cmo07g01222 467 Pfam GDA1/CD39 (nucleoside phosphatase) family 64 465 IPR000407 GO:0016787
Cmo07g01222 467 PANTHER APYRASE-LIKE PROTEIN 2 465 - -
Cmo07g01222 467 Gene3D Exopolyphosphatase. Domain 2 189 444 - -
Cmo07g01222 467 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 188 203 IPR000407 GO:0016787
Cmo07g01222 467 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 2 465 IPR000407 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g01222 Cmo-Chr7:6653630 Cmo13g00908 Cmo-Chr13:8057496 7.80E-20 dispersed
Cmo09g01060 Cmo-Chr9:5758340 Cmo07g01222 Cmo-Chr7:6653630 1.45E-173 transposed
Cmo05g00866 Cmo-Chr5:5657289 Cmo07g01222 Cmo-Chr7:6653630 1.06E-40 transposed
Cmo03g00264 Cmo-Chr3:3926741 Cmo07g01222 Cmo-Chr7:6653630 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g01222 K14641 - csv:101220305 769.615