Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g01231 ATGGGGAGTTCTGGATTCTCGTGGAAGTTGCCGGATCATCCTAAGCTTCCTAAGGATAAGACGGTAGCTCTTATTGTTTTGGATGGGTGGGGCGAAGCTGATCCTGATCGCTATAACTGTATCCATGTCGCCGAAACTCCCACCATGGATTCCCTTAAGAAGGGCGCCCCTGAGAGATGGAGGCTGATCAGGGCACATGGAAAGGCAGTAGGACTTCCTACAGAAGATGACATGGGCAACAGCGAGGTCGGACATAACGCGCTTGGTGCTGGACGTATCTATGCTCAAGGTGCAAAGCTTGTTGACCTTGCTCTTGCCTCTGGAAAAATATACGACGGAGAAGGTTTCAAATACATCAAGCAATCCTTTGAAACCGGCACATTGCATCTTATAGGATTATTGAGTGATGGTGGAGTGCACTCTAGGATAGATCAGTTACAGTTATTACTCAAAGGAGCAAGTGAGAATGGAGCTAAAAGAATCCGTGTCCATATACTTACTGATGGGCGTGATGTTTTGGATGGTTCGAGTGTGGGCTTTGTAGAAACTCTTGAAAATGACCTTGCCAAACTACGTGAGAGTGGGGTCGATGCACAAATCGCATCTGGTGGAGGCCGTATGTATGTGACAATGGATCGATATGAGAATGATTGGGAAGTTGTGAAGCGAGGATGGGACGCACAAGTACTTGGCGAAGCACCATACAAGTTCAGAAGTGCCGTTGAAGCTGTCAAGAAATTGAGAGAGGAAACCAAAGCAAGTGATCAGTATCTTCCTCCATTTGTCATAGTTGATGATAGCGGGAAGTCTGTGGGCCCAATTGTGGATGGAGATGCAGTAGTCACCTTTAATTTTAGAGCAGATCGGATGGTTATGATCGCCAAGGCCCTCGAATATGAAGATTTTGATAAATTTGACCGAGTTAGGGTCCCTAAAATTCGTTATGCTGGAATGCTTCAGTATGATGGTGAGTTGAAGCTTCCAAGCCATTACCTTGTCTCCCCCCCAGAGATTGAGAGAACATCTGGGGAATATCTTGTGCACAATGGTGTTCGGACCTTTGCTTGCAGTGAGACCGTCAAGTTTGGCCATGTTACATTCTTCTGGAATGGAAACCGTTCTGGATATTTTAACCCAGAAATGGAGGAATATGTGGAGATTCCTAGTGATTCTGGGATCACCTTTAATGTTAAGCCAAAGATGAAGGCCATAGAGATTGCTGAGAAGGCACGAGATGCTATTCTTAGCCGAAAATTCCATCAGGTACGTGTTAACCTGCCGAACGGTGACATGGTCGGACACACTGGTGATATTGAGGCCACAGTTGTAGCTTGCAAGGCTGCTGATGATGCCGTAAAAATTATCCTCGACGCAATCGAACAAGTAGGGGGAATATACGTTGTCACTGCAGATCACGGAAATGCAGAGGACATGGTGAAGAGAAACAAGTCGGGGCAGCCTCTTCTTGACAAAAATGGCAAAATTCAAATCCTGACCTCTCACACTCTTCAGCCAGTTCCTATTGCAATTGGAGGTCCGGGACTGGCCCCTGGAGTCCGATTCCGTAAGGATGTTCCTGATGGAGGGCTTGCCAATGTTGCTGCAACTGTTATCAATTTCCATGGGTATGAAGCTCCAAGCGACTACGAGACAACCCTAATTGAAAAAGTCGGATATGATCTTAGTTCATCTTCGATCACTCGGGCTGGTGCAGGGAATCTTGGCAAAGATTCTGCGGCGGTGACCGGCGGCCTGGTGAAGCAGCGTGAGCAACGCGCGGGGCAGTGGTGGACGGCGGCTCTTCCTCACAGGTTGGCAAGCAACGGCGTCCCGCGTCAATGTGGCTCGTCCGGCAGCGAGCACGAAGAAGAAGAAGAAGAAGAATCGGAATCTTCAGCTGCCATGGAGAAGTACGAGAAGCTCGAAAAGGTCGGAGAAGGAACTTACGGGAAGGTGTACAAGGCCAAAGATAAGGAAACTGGCCAACTTGTTGCTCTGAAGAAAACTCGCCTTGAAATGGACGAAGAAGGAGTTCCACCGACGGCGCTTCGTGAGGTTTCTCTTCTCCAATTGCTCTCTCAGTCTCTCTATGTTGTTCGTCTTCTCTGCGTTGAGCATGTTCACCACCATAAAAGTGGTAAGCCTCTTCTCTACCTTGTATTTGAGTATCTGGATACTGATCTCAAGAAGTACATCGATTCGCATCGCAAGGGACCCAACCCTAGGCCTCTTCCTTCTTCCCTTGTTCAGAGTTTCTTGTTTCAACTCTGTAAGGGTGTTGCGCATTGTCATAGTCATGGCGTTCTCCATCGTGACCTGAAACCGCAGAATCTTCTTCTGGATCAGGGTAAGGGTATTCTGAAGATTGCCGATCTTGGCCTTGGCCGTGCTTTTACTGTCCCTCTTAAGAGCTACACTCATGAGATTGTTACTCTCTGGTACCGTGCTCCTGAGGTTCTCCTTGGATCCACTCATTACTCCACTGCTGTCGATATGTGGTCTGTTGGTTGCATCTTCGCTGAAATGGTGAGAAGGCAGGCCCTGTTCCCCGGAGATTCTGAGTTTCAGCAGTTGCTCCACATTTTTAGGCTTCTAGGTACCCCCACCGAGAAACAGTGGCCTGGAGTTAGTTCTTTGCGGGACTGGCATGTCTATCCTCAATGGGAACCTCAGAATCTGACACGTGCAGTTCCATCCCTGGAACCCGAGGGTGCTGACCTTCTCTCGAAAATGCTTACATATAATCCGGCAGATAGAATCTCAGCGAAGGCAGCTCTAGAGCATCCGTACTTTGACAGCCTCGACAAGTCTCAGTATTAG 2820 48.19 MGSSGFSWKLPDHPKLPKDKTVALIVLDGWGEADPDRYNCIHVAETPTMDSLKKGAPERWRLIRAHGKAVGLPTEDDMGNSEVGHNALGAGRIYAQGAKLVDLALASGKIYDGEGFKYIKQSFETGTLHLIGLLSDGGVHSRIDQLQLLLKGASENGAKRIRVHILTDGRDVLDGSSVGFVETLENDLAKLRESGVDAQIASGGGRMYVTMDRYENDWEVVKRGWDAQVLGEAPYKFRSAVEAVKKLREETKASDQYLPPFVIVDDSGKSVGPIVDGDAVVTFNFRADRMVMIAKALEYEDFDKFDRVRVPKIRYAGMLQYDGELKLPSHYLVSPPEIERTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFNPEMEEYVEIPSDSGITFNVKPKMKAIEIAEKARDAILSRKFHQVRVNLPNGDMVGHTGDIEATVVACKAADDAVKIILDAIEQVGGIYVVTADHGNAEDMVKRNKSGQPLLDKNGKIQILTSHTLQPVPIAIGGPGLAPGVRFRKDVPDGGLANVAATVINFHGYEAPSDYETTLIEKVGYDLSSSSITRAGAGNLGKDSAAVTGGLVKQREQRAGQWWTAALPHRLASNGVPRQCGSSGSEHEEEEEEESESSAAMEKYEKLEKVGEGTYGKVYKAKDKETGQLVALKKTRLEMDEEGVPPTALREVSLLQLLSQSLYVVRLLCVEHVHHHKSGKPLLYLVFEYLDTDLKKYIDSHRKGPNPRPLPSSLVQSFLFQLCKGVAHCHSHGVLHRDLKPQNLLLDQGKGILKIADLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRLLGTPTEKQWPGVSSLRDWHVYPQWEPQNLTRAVPSLEPEGADLLSKMLTYNPADRISAKAALEHPYFDSLDKSQY 939
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6716325 6727299 + CmoCh07G012310.1 Cmo07g01231 386539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g01231 939 PANTHER 2,3-BISPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASE 1 557 IPR005995 GO:0004619|GO:0006007
Cmo07g01231 939 MobiDBLite consensus disorder prediction 607 635 - -
Cmo07g01231 939 Pfam BPG-independent PGAM N-terminus (iPGM_N) 102 322 IPR011258 GO:0004619|GO:0005737|GO:0006007|GO:0030145
Cmo07g01231 939 TIGRFAM pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 21 550 IPR005995 GO:0004619|GO:0006007
Cmo07g01231 939 Gene3D Transferase(Phosphotransferase) domain 1 726 939 - -
Cmo07g01231 939 Pfam Protein kinase domain 638 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo07g01231 939 ProSitePatterns Protein kinases ATP-binding region signature. 644 667 IPR017441 GO:0005524
Cmo07g01231 939 Gene3D Alkaline Phosphatase, subunit A 22 546 IPR017850 -
Cmo07g01231 939 SUPERFAMILY Alkaline phosphatase-like 20 548 IPR017850 -
Cmo07g01231 939 ProSiteProfiles Protein kinase domain profile. 638 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo07g01231 939 ProSitePatterns Serine/Threonine protein kinases active-site signature. 768 780 IPR008271 GO:0004672|GO:0006468
Cmo07g01231 939 Coils Coil 621 644 - -
Cmo07g01231 939 Gene3D Phosphorylase Kinase; domain 1 621 725 - -
Cmo07g01231 939 PANTHER 2,3-BISPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASE 2-RELATED 1 557 - -
Cmo07g01231 939 Pfam Metalloenzyme superfamily 20 544 IPR006124 GO:0003824|GO:0046872
Cmo07g01231 939 SUPERFAMILY 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain 96 331 IPR036646 GO:0004619|GO:0005737
Cmo07g01231 939 CDD iPGM 20 554 IPR005995 GO:0004619|GO:0006007
Cmo07g01231 939 SUPERFAMILY Protein kinase-like (PK-like) 634 934 IPR011009 -
Cmo07g01231 939 Gene3D - 96 340 IPR036646 GO:0004619|GO:0005737
Cmo07g01231 939 SMART serkin_6 638 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g00278 Cmo07g01231 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01496 Cmo-Chr4:7659026 Cmo07g01231 Cmo-Chr7:6716325 1.40E-112 dispersed
Cmo07g01231 Cmo-Chr7:6716325 Cmo18g00940 Cmo-Chr18:10556806 1.50E-114 dispersed
Cmo01g02100 Cmo-Chr1:14539206 Cmo07g01231 Cmo-Chr7:6716325 5.42E-144 transposed
Cmo04g02106 Cmo-Chr4:13382655 Cmo07g01231 Cmo-Chr7:6716325 8.17E-13 transposed
Cmo03g00278 Cmo-Chr3:4040654 Cmo07g01231 Cmo-Chr7:6716325 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74490 PF01676 Metalloenzyme 4.10E-111 CL0088 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g01231 K15633 - csv:101217925 1041.18