Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g01258 ATGAAGGAAATCCATCACGTACGTCTTGCATTTGCATCTATCTGTGTTTTCGTTTTCTTGTTCTTCAATGTTCATGTGATTTCAGCACAAAACTACATCCCTCGGGATTTCATTCTCCTCAATTGTGGAGGACCTTCCACTGCCAACGACATGGATGGCCGGAAATGGATGACCGATGACAAATCCAAGTTTCTTCCCGCGACAGGGAATAGCACTACATCGAGAGCCGCTACTCAGGTTCCTTCAGTTCTTGAAACTCCTTTCATGACGGCTAGGGTTTTTCACTCTAATTTCACCTATACCTTTCCTGTGGCTCCTACTCGTTTATTCCTTCGTCTGTACTTTTATCCTTCTTCCTATGGCGGCCTTGATGCATCTGATGCTCGATTCTCTGTTTCCGCTCAAACCTATACTCTCCTTAATAACTTCAGCGCTTCACAAACCGCTGAGGCTTTGTATTCTGCGACTATCGTTAAGGAATACTCGATCAATGTTGAAAATGGAAGGTTGAGCTTGACTTTCACTCCATCCCCCACTCATCCAAAGGCTTATGCGTTTGTTAACGGGATTGAAATTGTATCTATGCCTGATATTTACAGTGAAACTTCCGGGACTGTTTTGATTGTTGGCCAATCTAGTCCTTTCACTGTGGATAACACCACTGCGCTCGAGAACATCCATCGGTTGAATGTCGGAGGGAATTATATTTCGCCTTCTGCTGATACGGGGATGCATAGGCCTTGGTTTGATGATTCTCCATATTTGTTTGCTGCAGCAAAGGGAGTGACAACGATTACGGATCAGAACACAAGGATTAGTTATCCTCCCAGTATTTCTACTTATGTTGCGCCGGTTGATGTCTACTCTACTGCTAGAACTATGGGACCTGATAACAATGTCAATCTGAATTATAATTTGACATGGGTTTTCTCTGTTGATTCTGGCTTCTTTTACCTTGTTAGGCTCCATTTTTGTGAGATTGCTGCAGGTATCACGAAGGTTAACCAAAGAGTGTTCGACATTTTCATCTTTAATCAAACTGCTACGCTGGGTGTTGACGTGATTGAATCGGCTGGAAGTAATTATGCTGCTGTGTTCAAAGATTATGTGGTTATGGTTCCAAGTTATGGAGATCCGCAGAAGGATTTATGGCTCCAGCTGCATCCACACAAGTCTTCACGACCCAATTACTATGATTCAATCTTGAACGGAGTGGAGATCTTCAAAATTAACAACTCGGATGCTAATCTTGCAGGGCCGAATCCTGTTCCTGCAGCGAAACAAGAGATTATAGATCCATCATTAGCCATCCCAGGATCATCTCACGGTAAATCGAAGAACAGGATGGCGATTATAGCTGGAGTTGTTTGTGGTGCAGTTGTTTTGGGTCTGATCATTGGTTTCTTTGTTGTTGCTGCTAAGCGTCGGCGTGGGATGGATTGTATTTCTGTTACAGGACAATCAGGATGGCTTACTCTTTCTGTCTATGGAAATTCCCCTTTGGCTGAGATAAATGCAACTGGAAGCTATGCATCCTCCCTGCTTTCCAATTGCCGCCACTTCTCATTTGCTGAGATCAAGGCTGCCACAAGGGAGTTTGATGAATCTTTAGTACTTGGAGTGGGAGGTTTTGGCAAAGTTTACAAGGGAGAAATTGATGGTGGGACTAGGAAAGTTGCTATCAAGCGTGGGAACCCTCTCTCGGAGCAAGGTGTTCATGAGTTCCAAACTGAGATTGAAATGCTGTCTAAGCTTCGCCATCGCCACCTTGTTTCATTGATTGGCTACTGCGAAGAGAATTGTGAAATGATCCTTGTTTATGATTACATGTCTCGTGGAACACTCCGTGAGCATCTCTACAAGACCCACAACCCACCATTGTCTTGGAAGCAAAGGCTTGAGATTTGCATTGGAGCTGCCCGTGGACTGCATTATCTGCACACTGGTGCCAAGCATACAATTATTCACCGAGATGTGAAGACAACCAATATCCTTTTGGATGAAAAGTGGGTGGCGAAAGTATCCGATTTCGGGTTGTCGAAAACTGGTCCGACAATGGATCACACACATGTTAGCACTGTAGTGAAAGGTAGTTTTGGATACTTGGATCCTGAATACTTTAGACGACAGCAATTGACTGAGAAATCAGATGTTTACTCGTTCGGTGTCGTTCTCTTTGAGGTTCTATGCGCTCGGCCAGCTCTGAACCCAACACTCCCCAAGGAGGAAGTGAGTTTAGCAGAATGGGCTGCTCATTGCTACATCAAAGGCGTTTTAGATCAGATAATCGATACGTTCCTAAAGGGAAAGATTGCATCCGAGTGTCTCAAGAAGTTTGCGGAGACAGCAATGAAATGTGTGTCCGATCAGGGCATTGACAGGCCGTCCATTGGCGACGTTCTCTGGAATCTAGAGTTTGCATTGCAGCTGCAGGAGAGTGCAGAAGAGAGCGGCGAGGTAGGCAGCGGAATGGAAGTCAAAGGTCAGCTTGACGTTGCTTACAAAGGGAAGATGGATCCTGATGCTTCCCCTGGCATGGATGGAAACATAACCGACTCGAGAAGCACCGGAATCAGTATGAGCATCGGAGGCCGAAGCCTCGCCAGTGAAGATTCCTACGGGTTGACGCCGAGTACCGTCTTCTCACAGATCTTGAACCCAAAAGGTCGTTAA 2673 45.23 MKEIHHVRLAFASICVFVFLFFNVHVISAQNYIPRDFILLNCGGPSTANDMDGRKWMTDDKSKFLPATGNSTTSRAATQVPSVLETPFMTARVFHSNFTYTFPVAPTRLFLRLYFYPSSYGGLDASDARFSVSAQTYTLLNNFSASQTAEALYSATIVKEYSINVENGRLSLTFTPSPTHPKAYAFVNGIEIVSMPDIYSETSGTVLIVGQSSPFTVDNTTALENIHRLNVGGNYISPSADTGMHRPWFDDSPYLFAAAKGVTTITDQNTRISYPPSISTYVAPVDVYSTARTMGPDNNVNLNYNLTWVFSVDSGFFYLVRLHFCEIAAGITKVNQRVFDIFIFNQTATLGVDVIESAGSNYAAVFKDYVVMVPSYGDPQKDLWLQLHPHKSSRPNYYDSILNGVEIFKINNSDANLAGPNPVPAAKQEIIDPSLAIPGSSHGKSKNRMAIIAGVVCGAVVLGLIIGFFVVAAKRRRGMDCISVTGQSGWLTLSVYGNSPLAEINATGSYASSLLSNCRHFSFAEIKAATREFDESLVLGVGGFGKVYKGEIDGGTRKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMSRGTLREHLYKTHNPPLSWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTMDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPALNPTLPKEEVSLAEWAAHCYIKGVLDQIIDTFLKGKIASECLKKFAETAMKCVSDQGIDRPSIGDVLWNLEFALQLQESAEESGEVGSGMEVKGQLDVAYKGKMDPDASPGMDGNITDSRSTGISMSIGGRSLASEDSYGLTPSTVFSQILNPKGR 890
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6881896 6884568 - CmoCh07G012580.1 Cmo07g01258 386566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g01258 890 SMART serkin_6 533 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo07g01258 890 Pfam Malectin-like domain 40 410 IPR024788 -
Cmo07g01258 890 Gene3D Transferase(Phosphotransferase) domain 1 610 825 - -
Cmo07g01258 890 Gene3D Phosphorylase Kinase; domain 1 502 609 - -
Cmo07g01258 890 Pfam Protein tyrosine and serine/threonine kinase 538 800 IPR001245 GO:0004672|GO:0006468
Cmo07g01258 890 SUPERFAMILY Protein kinase-like (PK-like) 508 806 IPR011009 -
Cmo07g01258 890 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 32 856 - -
Cmo07g01258 890 PANTHER OS07G0166700 PROTEIN 32 856 IPR045272 GO:0004714|GO:0006468
Cmo07g01258 890 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672|GO:0006468
Cmo07g01258 890 ProSiteProfiles Protein kinase domain profile. 533 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo07g01258 890 ProSitePatterns Protein kinases ATP-binding region signature. 539 562 IPR017441 GO:0005524
Cmo07g01258 890 CDD STKc_IRAK 539 805 - -
Cmo07g01258 890 Gene3D - 222 411 - -
Cmo07g01258 890 Gene3D - 37 196 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g01235 Cmo-Chr5:9634231 Cmo07g01258 Cmo-Chr7:6881896 0 dispersed
Cmo07g01258 Cmo-Chr7:6881896 Cmo12g01150 Cmo-Chr12:10427951 0 dispersed
Cmo15g00249 Cmo-Chr15:1224041 Cmo07g01258 Cmo-Chr7:6881896 0 dispersed
Cmo03g00298 Cmo-Chr3:4189461 Cmo07g01258 Cmo-Chr7:6881896 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74493 PF12819 Malectin_like 1.50E-40 CL0202 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g01258 - - cpep:111781600 1675.6