Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g01262 ATGAGTGCTGGTCAGCCCCTGTTGGCTTCGTCAGAATCTGCATCAGTTATTGAACACCGATCCCCATCTCCAAATTTTGGTTCTGCTGGTTCTCTATGTCGCAGTGCTTCCTTCACCTCTTCCACTCACGAGGATGCTCAGAGTGACGTCGTGGATGTGAAGGAAAACTGCGCCGCCTCTTTCGGAGATAAAGATTGGAGCGTTGAGGATTCCCTCAGACGTTCCACTTCTCTTACTAGGAGGAGGCAGTATCATACTATTGGCTCTCTGTTTCCTAACCGGTCACCTTTTGGCGACCCCACGCAGGATAGAAGACGCCTGGTCTCGTGGGGTGCAATGGAGCTACATAGTATCAACGATAACCCTCCGAGCTTTGAACTCTCTAGAGTTCAGGAGAAATTGCATAAGGCACAAAGAAGTCATCATAAGAGTATGCAGTTCGAAGATAATTTACAGCATGACGATAATCCAAGGTTGATATACATCAATGATCCTAGGAGAACTAATGACAAGTATGAGTTCACAGGAAATGAGATAACAACTAGCAAGTACACATTGATTACCTTCTTGCCAAAGAATCTCTTCATTCAGTTCCACCGGGTTGCCTATCTTTATTTTCTTGCTATTGCAGCTCTCAACCAGCTTCCACCTTTGGCGGTTTTTGGGAGAACGGTATCTCTTTTTCCACTCCTGTTTGTGCTCTGTGTTACAGCTATTAAAGATGGCTATGAGGATTGGCGAAGACACAGATCAGATCGCAATGAGAACAATAAACAGGCTCTGGTGCTTCAATCAGATGAATTCCGATTGAAAGTGTGGAAAAAAATACGAGCGGGTGAAGTTGTAAAGATTTGTGCAGATGAGGTCATTCCTTGTGACATGGTTTTATTGGGGACAAGTGATCCTAGTGGCCTTGCTTACATCCAAACAATGAATTTGGATGGTGAGTCAAACTTGAAGACAAGGTATGCTAGGCAGGAAACCGCATCAGCAGTAGCTGAGGGATGCTCGTATTCGGGTCTTATTAGATGTGAACAACCTAATAGGAACATTTATGAGTTCACTGCCAATATGGAGTTCAACGGCCATAAATTTCCCCTCAGCCAGTCGAACATAGTCTTGCGTGGTTGTCAGCTGAAGAACACGGAATGGATTATTGGGGTGGTCGTCTATGCTGGACAAGAGACAAAAGCCATGTTAAACAGTGCCGTGTCTCCTGCCAAGCGAAGTAAACTGGAGGGTTACATGAACAGGGAAACGTTGTGGTTGTCAATCTTCCTCTTTATCATGTGTCTAGTTGTGGCCCTTGGAATGGGCTTGTGGCTTGTTCGTCACGAGGAACAGCTTGATACCTTGCCATATTACAGGAAAACGTATTTCACAACTGGGGCAGAAAATGGCAAGAGGTACAGGTTTTATGGAATACCTATGGAAACCTTTTTCTCCTTTCTAAGTTCGATTATAGTTTTTCAGATCATGATACCGATATCCCTTTATATTACAATGGAGATGGTGAGACTGGGCCAGTCATATTTCATGATTGAAGATAAGCACATGTACTGTAGAATCTCTCGCTCAAGGTTTCAGTGCAGATCATTAAACATCAATGAAGATCTTGGTCAAGTTCGCTACATATTTTCCGATAAAACAGGAACGCTTACTGAAAATAAAATGGAATTCAAAAGAGCAAGTGTATATGGGAGGAATTATGGGAACAACTTATCCGAGGGATATCCATCAATGTTGTATTCCGTTTCAGAAACTTTAGGGAGGAGGAAGTGGAAACTTAAATCTGACGTTGCCGTTGATACCGATCTTGTCAAATTATTGCACGAGGACCCAAACGGAGATGAAAAGATTGCTGCACATGATTTTTTTCTTACCTTGGCTGCATGCAATACTGTAATTCCTATTCTCATGGATGACGAACCTAGTTATGCGAATGGTGAATTGCACGAGGATTTTGAAACTATTGGTTATCAGGGGGAATCCCCTGATGAGCAAGCTCTAGTTGCTGCAGCCTCTGCTTATGGATATACCCTTTTCGAGCGCACATCCGGGCATATTGTTATCGATGTCAAGGGTGAGAACTTAAGGTTAGAAGTTCTGGGTTTACATGAGTTCGATAGCGTTCGCAAAAGAATGTCTGTTGTCATCAAATTCCCCGATAACACTATAAAGGTGCTGGTAAAAGGCGCTGATACTTCAATGTTGAGTATTTTAGGCATCGACTCTGATAGGGAAGAGTTTATCAAGGATACTACTCAGAACCATTTGTGTGATTATTCAATGGAAGGGTTGCGAACACTCGTAGTTGCTGCTAAAGATCTTACAGATTCCGAATTTGAGCTGTGGCAGAGCAGATATGAGGATGCTAGTACTTCACTGACTGAACGAGCAGTAAAACTACGTCAGACAGCAGCCCTTATAGAATGTGACCTAAAGCTTTTGGGTGCAACTGCTATCGAGGACAAGCTTCAAGATGGTGTACCTGAAGCCATTGAATCGCTTCGGCAGGCGGGAATAAAGGTTTGGATTCTGACTGGAGATAAGCAGGAGACGGCCATATCAATCGGTCTCTCCTGCAAACTGCTGACTCCAGATATGCAGTCAATTATTATCAATGGAAATTCCGAGAACGATTGCAGGCAACTTTTAGGTGACGCCATAGCAAAATTTGGTATTAAATCAGGGCAGGGCGGAAGTCCTAGACAGAAGCTGAACAATTCTGAGAATGACTGTAACGATACACTGAAGACGTCTAGTATGCCAGATTTTAATGAAGTGAAAGAAGAAGAAGAAGAAGAAGAAGAAGTGACTGATAAACCACTAGCTCTAATAATAGATGGAAACAGTTTGGTCTACATTTTGGAGAAGGAATTGGAGTCGCAGCTTTTTGACCTTGCAACTTCGTGCAATGTCGTGCTTTGCTGTCGTGTTGCACCCCTGCAGAAAGCAGGAATTGTCGATTTGATCAAGAGTAGAACTGATGACATGACATTGGCGATTGGAGATGGGGCAAATGACGTCTCAATGATTCAGATGGCCGATGTAGGCGTGGGTATATGCGGACAGGAGGGGCGTCAGGCTGTAATGGCATCTGATTTTGCCATGGGACAATTTCGCTTTTTGAAACGATTACTTCTAGTGCATGGACATTGGAACTATCAACGCGTAGGCTACATGGTTCTTTACAACTTTTACCGCAATGCTGTTTTCGTCCTGATGCTCTTCTGGTACATTCTATGCACAGCATTCTCAACAACTTCAGCTTTGACTGATTGGAGTAGCGTGTTTTACTCTGTTATTTATACGTCGATCCCAACTATTTTTGTTGGTATTCTGGACAAAGACTTGAGTGACAAAACTCTACTGCAATATCCTAAGCTCTATGGTGCTGGCCATAGACAGGAGGCATACAATTTGCGTCTCTTTTGGTTCACAATGATCGATACCCTGTGGCAGAGTCTCGTACTCTTCTACGTGCCGTTATACATCTACAGGGAGAGTTCCATTGATATATGGAGCTTGGGAAGTCTGTGGACCATAGCAGTTGTTATACTCGTGAACGTACACTTGGCGATGGATGTTCAACGTTGGGTGTATATTACACATGCTGCAGTTTGGGGATCCATAGTCATAACATATGCCTGCATGGTCGTGTTGGATTCGATACCCGTTTTCCCTAATTACTGGACGATTTTTCATCTGGCCAAGTCCCCGACATATTGGTTGACTATATTGCTCATAATAGTTGTAGGATTGCTTCCGCGTTATCTTTTTAAAGTCGTAAACCAAAGATTTTGGCCCTCGGATATTCAAATAGCCAGAGAAGCCGAGGTACTGGGAAAACGAAAAGGTAATGAACAATTGGGTTCCAAGCAAGATCGAAACTCCGACTAA 3903 43.33 MSAGQPLLASSESASVIEHRSPSPNFGSAGSLCRSASFTSSTHEDAQSDVVDVKENCAASFGDKDWSVEDSLRRSTSLTRRRQYHTIGSLFPNRSPFGDPTQDRRRLVSWGAMELHSINDNPPSFELSRVQEKLHKAQRSHHKSMQFEDNLQHDDNPRLIYINDPRRTNDKYEFTGNEITTSKYTLITFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNKQALVLQSDEFRLKVWKKIRAGEVVKICADEVIPCDMVLLGTSDPSGLAYIQTMNLDGESNLKTRYARQETASAVAEGCSYSGLIRCEQPNRNIYEFTANMEFNGHKFPLSQSNIVLRGCQLKNTEWIIGVVVYAGQETKAMLNSAVSPAKRSKLEGYMNRETLWLSIFLFIMCLVVALGMGLWLVRHEEQLDTLPYYRKTYFTTGAENGKRYRFYGIPMETFFSFLSSIIVFQIMIPISLYITMEMVRLGQSYFMIEDKHMYCRISRSRFQCRSLNINEDLGQVRYIFSDKTGTLTENKMEFKRASVYGRNYGNNLSEGYPSMLYSVSETLGRRKWKLKSDVAVDTDLVKLLHEDPNGDEKIAAHDFFLTLAACNTVIPILMDDEPSYANGELHEDFETIGYQGESPDEQALVAAASAYGYTLFERTSGHIVIDVKGENLRLEVLGLHEFDSVRKRMSVVIKFPDNTIKVLVKGADTSMLSILGIDSDREEFIKDTTQNHLCDYSMEGLRTLVVAAKDLTDSEFELWQSRYEDASTSLTERAVKLRQTAALIECDLKLLGATAIEDKLQDGVPEAIESLRQAGIKVWILTGDKQETAISIGLSCKLLTPDMQSIIINGNSENDCRQLLGDAIAKFGIKSGQGGSPRQKLNNSENDCNDTLKTSSMPDFNEVKEEEEEEEEVTDKPLALIIDGNSLVYILEKELESQLFDLATSCNVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRVGYMVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSIPTIFVGILDKDLSDKTLLQYPKLYGAGHRQEAYNLRLFWFTMIDTLWQSLVLFYVPLYIYRESSIDIWSLGSLWTIAVVILVNVHLAMDVQRWVYITHAAVWGSIVITYACMVVLDSIPVFPNYWTIFHLAKSPTYWLTILLIIVVGLLPRYLFKVVNQRFWPSDIQIAREAEVLGKRKGNEQLGSKQDRNSD 1300
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6898040 6903297 + CmoCh07G012620.1 Cmo07g01262 386570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g01262 1300 Gene3D - 236 402 - -
Cmo07g01262 1300 Pfam Phospholipid-translocating ATPase N-terminal 160 225 IPR032631 -
Cmo07g01262 1300 Pfam E1-E2 ATPase 258 504 - -
Cmo07g01262 1300 SUPERFAMILY Calcium ATPase, transmembrane domain M 174 1270 IPR023298 -
Cmo07g01262 1300 SFLD p-type atpase 530 1054 IPR044492 -
Cmo07g01262 1300 Pfam Phospholipid-translocating P-type ATPase C-terminal 1031 1271 IPR032630 -
Cmo07g01262 1300 Gene3D - 660 797 IPR023299 GO:0000166
Cmo07g01262 1300 Pfam haloacid dehalogenase-like hydrolase 954 1020 - -
Cmo07g01262 1300 ProSitePatterns E1-E2 ATPases phosphorylation site. 548 554 IPR018303 -
Cmo07g01262 1300 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 479 569 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cmo07g01262 1300 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 973 1089 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cmo07g01262 1300 Gene3D - 814 1043 IPR023214 -
Cmo07g01262 1300 Gene3D - 556 567 IPR023299 GO:0000166
Cmo07g01262 1300 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 552 830 IPR023299 GO:0000166
Cmo07g01262 1300 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 151 1298 - -
Cmo07g01262 1300 MobiDBLite consensus disorder prediction 897 938 - -
Cmo07g01262 1300 Gene3D - 543 555 IPR023214 -
Cmo07g01262 1300 Gene3D - 522 542 - -
Cmo07g01262 1300 Pfam haloacid dehalogenase-like hydrolase 543 858 - -
Cmo07g01262 1300 SFLD C1.7: P-type atpase like 530 1054 - -
Cmo07g01262 1300 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 151 1298 - -
Cmo07g01262 1300 SUPERFAMILY Calcium ATPase, transduction domain A 257 398 IPR008250 -
Cmo07g01262 1300 SUPERFAMILY HAD-like 541 1049 IPR036412 -
Cmo07g01262 1300 MobiDBLite consensus disorder prediction 901 924 - -
Cmo07g01262 1300 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 174 1278 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Cmo07g01262 1300 MobiDBLite consensus disorder prediction 1 34 - -
Cmo07g01262 1300 CDD P-type_ATPase_APLT_Dnf-like 176 1163 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g00303 Cmo07g01262 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02613 Cmo-Chr4:19053509 Cmo07g01262 Cmo-Chr7:6898040 0 dispersed
Cmo07g01262 Cmo-Chr7:6898040 Cmo15g00548 Cmo-Chr15:2610755 0 dispersed
Cmo11g01993 Cmo-Chr11:13651239 Cmo07g01262 Cmo-Chr7:6898040 0 dispersed
Cmo19g01037 Cmo-Chr19:9055080 Cmo07g01262 Cmo-Chr7:6898040 0 dispersed
Cmo03g00303 Cmo-Chr3:4214054 Cmo07g01262 Cmo-Chr7:6898040 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g01262 K14802 - csv:101206692 2325.82