Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g01285 ATGGGAGCCTGCTGCACAAAAGATTCAATCAATGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAGTACATGACCCATGACAAGGATGAGAGGGATTCCAACCGGGGAGATGATGGAGCAGAGATTCGTCGTGGCGATGACGGAGCCATCGTTCGACTCCATGGATCCTCTGCGTTCATATCAATGTATACTCAACGAGGAAGAAAAGGAATCAATCAAGATGCAATGACGGTTTGGGAGGATTTCTCAGGGGAGAAAGGTTTGGTGTTTTCTGGAGTTTTTGATGGCCATGGTCCGTTTGGTCATAGGGTTGCTCGCCATGCACGAGACATGCTGCCCTCCAAGCTCTCCAAGGCTATCAAAAAGCAGCGGCGGCCATCACATCTCCAAAATGGGGTTTCTAAAGCTTCTGTTCAACCAAACAACAATGAAGGAAATCAACGAAATCCATTGGTTTCAAGATGGGAAGCTGCTTTTGAAGAAGCTTATACGGATTTTGATCGAGACCTCGGCTTTGATTCATCTATTGATTGTTTCTGCAGTGGAACAACAGCCATGTCCATTATCAAACAGGGAGAGCATTTGGTGGTTGCAAATGTGGGTGACTCCCGGGCGGTTCTTTGCACCAGAGGAGACAACCATCAGCATATTCCCATCCAATTAACAGCTGACCAGAAACCAAATGTTCCAAGCGAAGCAGAAAGAATAAAGAAATGCCAGGGGAGAATCACAGCAGATAAAGAAGAACCAGATATTTTCAGAGTATGGGTACCAGATGCAGATTATCCTGGCCTCGCCATGTCAAGATCCTTTGGAGATTTTTGCCTCAAGGATTACGGCCTCATCCCAACCCCTGAAGTCGCCTACAGAAAACTCACAAGAAAAGACGAGTTCATCGTTCTAGCAACAGATGGAATCTGGGATGTACTGACGAACAAGCAAGTAATCAACATAGTTGCTTCAGCAAAGAACCGATCCATGGCGGCGAAATTAGTAGTGAAACTAGCAGCACGAGAATGGAAACGCAAATTTATAGGGTTGACGATCGACGACTGTACAGTGATTTGCTTGTTCTTCAAGAATCCACCATTGCTGAGCAAATCAATGACGAACGTAGGGCGGCGGAGCATGAGAAGCCATCCGGAACTGGCAGTTTCAAGAAGCTGTAGATCCATGGGGATCGACAGAAAAATAGGAGAAGAAGAAGGTGAATCAGTGAATAGAGAATCAAAGGAAGATCGGAAGGGTGTAAAAGGATTAAACAGAGTGAATTCAATGATGGGGATTTCACGAACCACTAGGAGTTTGAGCCACAATCAGAAAGCGCCCAAGTTTTTCTATGAAATTGAAGCTCGCGAAAGCGGCACTGCAATGGCGAAGGGCAAGAAGAAGAAGAACTAA 1407 46.2 MGACCTKDSINGGGGGGGGGGGGEYMTHDKDERDSNRGDDGAEIRRGDDGAIVRLHGSSAFISMYTQRGRKGINQDAMTVWEDFSGEKGLVFSGVFDGHGPFGHRVARHARDMLPSKLSKAIKKQRRPSHLQNGVSKASVQPNNNEGNQRNPLVSRWEAAFEEAYTDFDRDLGFDSSIDCFCSGTTAMSIIKQGEHLVVANVGDSRAVLCTRGDNHQHIPIQLTADQKPNVPSEAERIKKCQGRITADKEEPDIFRVWVPDADYPGLAMSRSFGDFCLKDYGLIPTPEVAYRKLTRKDEFIVLATDGIWDVLTNKQVINIVASAKNRSMAAKLVVKLAAREWKRKFIGLTIDDCTVICLFFKNPPLLSKSMTNVGRRSMRSHPELAVSRSCRSMGIDRKIGEEEGESVNRESKEDRKGVKGLNRVNSMMGISRTTRSLSHNQKAPKFFYEIEARESGTAMAKGKKKKN 468
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7102504 7105153 + CmoCh07G012850.1 Cmo07g01285 386593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g01285 468 SMART PP2C_4 45 359 IPR001932 -
Cmo07g01285 468 Pfam Protein phosphatase 2C 85 338 IPR001932 -
Cmo07g01285 468 ProSiteProfiles PPM-type phosphatase domain profile. 61 361 IPR001932 -
Cmo07g01285 468 SUPERFAMILY PP2C-like 58 364 IPR036457 -
Cmo07g01285 468 MobiDBLite consensus disorder prediction 25 45 - -
Cmo07g01285 468 CDD PP2Cc 61 361 IPR001932 -
Cmo07g01285 468 PANTHER ALPHABET, ISOFORM E-RELATED 1 406 - -
Cmo07g01285 468 MobiDBLite consensus disorder prediction 123 150 - -
Cmo07g01285 468 Gene3D - 53 363 IPR036457 -
Cmo07g01285 468 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 1 406 - -
Cmo07g01285 468 MobiDBLite consensus disorder prediction 129 150 - -
Cmo07g01285 468 MobiDBLite consensus disorder prediction 1 45 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g00330 Cmo07g01285 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g01285 Cmo-Chr7:7102504 Cmo05g00859 Cmo-Chr5:5570993 9.42E-111 dispersed
Cmo03g00330 Cmo-Chr3:4439194 Cmo07g01285 Cmo-Chr7:7102504 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g01285 - - cpep:111780962 917.916