Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo07g01305 | ATGGCGGCAGCTCAGCTCACAGGATCTCTAATTTCTGCGAGGAACCTGCCTTCTTTCGATGGCCTTCGTCCTTCTGCGGTGAAATTCTCTCCTTCTATCGTTCATATGATAGTGGGGGGTCGGGCCAACAGATCTTACACTGGCTTGGTTGTTAGAGCTGCTACTGTGGTTGCTCCAAAGTACACTTCGATCAAGCCATTGGGCGACAGAGTGCTGGTGAAAATAAAGGAAGCTGAAGAGAAGACTGATGGAGGGATTTTACTTCCAACAACGGCTCAGTCCAAACCTCAAGGTGGGGAGGTTGTTGCGGTTGGAGAAGGCAAGTCAATTGGAAATACCAAAGTGGAAAGTAGTGTAAAGACTGGTGCTCAAGTTGTGTACTCCAAGTATGCTGGAACTGAGTTAGAGTTCAATGGTTCAAAGCATCTTATTCTGAAGGAAGATGATATCGTCGGTATTCTAGAAACCGATGATGCGAAAGATCTTCAGCCCCTAAACGACAGGGTCTTGATCAAGGTGGCTGCGGCTGAGGAAAAAACAGCAGGAGGTTTGCTGCTGACAGAGGCATCCAAAGAGAAACCGTCGATCGGAACGGTGATAGCAGTTGGCCCTGGTCATCTGGACGAGGAGGGCAACAAGAAACCGCTTTCGATTGCAGCGGGAAATAACGTGATGTACTCGAAGTATGCTGGGAACGAGTTCAAGGGCAAAGATGGATCTGATTTCATCGCTTTGAGGGCTTCAGACGTGATTGCAGTTCTATCTTAG | 768 | 48.18 | MAAAQLTGSLISARNLPSFDGLRPSAVKFSPSIVHMIVGGRANRSYTGLVVRAATVVAPKYTSIKPLGDRVLVKIKEAEEKTDGGILLPTTAQSKPQGGEVVAVGEGKSIGNTKVESSVKTGAQVVYSKYAGTELEFNGSKHLILKEDDIVGILETDDAKDLQPLNDRVLIKVAAAEEKTAGGLLLTEASKEKPSIGTVIAVGPGHLDEEGNKKPLSIAAGNNVMYSKYAGNEFKGKDGSDFIALRASDVIAVLS | 255 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 7267547 | 7270909 | + | CmoCh07G013050.1 | Cmo07g01305 | 386613 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo07g01305 | 255 | Hamap | Co-chaperonin GroES [groES]. | 161 | 255 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Cmo07g01305 | 255 | Pfam | Chaperonin 10 Kd subunit | 64 | 153 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Cmo07g01305 | 255 | Pfam | Chaperonin 10 Kd subunit | 162 | 253 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Cmo07g01305 | 255 | CDD | cpn10 | 162 | 254 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Cmo07g01305 | 255 | PRINTS | 10kDa chaperonin signature | 64 | 79 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Cmo07g01305 | 255 | PRINTS | 10kDa chaperonin signature | 86 | 107 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Cmo07g01305 | 255 | PRINTS | 10kDa chaperonin signature | 120 | 132 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Cmo07g01305 | 255 | PRINTS | 10kDa chaperonin signature | 141 | 154 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Cmo07g01305 | 255 | PANTHER | 10 KDA HEAT SHOCK PROTEIN | 1 | 255 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Cmo07g01305 | 255 | ProSitePatterns | Chaperonins cpn10 signature. | 162 | 186 | IPR018369 | GO:0005524|GO:0006457 | |
Cmo07g01305 | 255 | SUPERFAMILY | GroES-like | 161 | 254 | IPR011032 | - | |
Cmo07g01305 | 255 | Gene3D | GroES chaperonin | 157 | 255 | IPR037124 | GO:0006457 | |
Cmo07g01305 | 255 | Gene3D | GroES chaperonin | 56 | 156 | IPR037124 | GO:0006457 | |
Cmo07g01305 | 255 | SMART | Cpn10_2 | 63 | 154 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Cmo07g01305 | 255 | SMART | Cpn10_2 | 161 | 254 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Cmo07g01305 | 255 | Hamap | Co-chaperonin GroES [groES]. | 63 | 155 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Cmo07g01305 | 255 | ProSitePatterns | Chaperonins cpn10 signature. | 64 | 88 | IPR018369 | GO:0005524|GO:0006457 | |
Cmo07g01305 | 255 | PIRSF | Cpn21 | 1 | 255 | IPR017416 | GO:0006457|GO:0046914|GO:1901671 | |
Cmo07g01305 | 255 | CDD | cpn10 | 63 | 154 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Cmo07g01305 | 255 | PANTHER | 20 KDA CHAPERONIN, CHLOROPLASTIC | 1 | 255 | - | - | |
Cmo07g01305 | 255 | SUPERFAMILY | GroES-like | 62 | 155 | IPR011032 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo07g01144 | Cmo-Chr7:6108716 | Cmo07g01305 | Cmo-Chr7:7267547 | 3.20E-07 | dispersed | |
Cmo07g01305 | Cmo-Chr7:7267547 | Cmo10g00813 | Cmo-Chr10:3788365 | 4.41E-170 | dispersed | |
Cmo07g01305 | Cmo-Chr7:7267547 | Cmo06g01215 | Cmo-Chr6:9245490 | 2.83E-07 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo07g01305 | K04078 | - | csv:101212396 | 446.432 |