Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo07g01328 | ATGTGGTCTAAGTCCGATAATAAACCGGACGGATCTGAGATATTTAGCAACTCATCAAAAGGGGAAAACGATTGTCACGGAGGAATGAACGTAAACGCACCAAATTTCGTGAAAAATCCTCCGGATTCTCTCAGAAGAATCGATCAAATCGCCAAAAACGGCATAAATTCCGGGAATCAGACGGCGACGATGAACCACGAGTTTCATTCCGGGCAGGCAGGGGGGTCGATTGCGCCGATTCCGAGCGGTGCACCTGCAACAAACATGAAGAACATCAACAATAACAACAACTCTACTTTCTTTCCGACGAAGAGCGGCTGCGATGGCATGGAGACGCTAGGAATGGTGATTAAACCGCACACAGGCGGGGATGTGCGATGGGACGCTGTGAACATGGTGTCGAAAGGAGGCCAGTTGAATCTGAGCCATTTCAGGCTTCTGAAGCGGCTTGGTTATGGCGATATCGGAAGTGTTTATCTGGTGGAATTGAGAGGAACTGATACGTTTTTCGCCATGAAAGTTATGGACAAAGCTTCATTGGCGAGTCGGAATAAGGTTGTTAGGGCACAGACGGAGAGGGAGATTTTAGGGCTTTTGGATCATCCATTTTTGCCGACTCTGTATTCCTATTTCGAAACTGATAAGTTCTATTGCTTGGTTATGGAGTTTTGTAGCGGCGGAAATCTTCATTCTCTTCGTCAGAAACAACCTAACAAGTATTTCACAGAAGAAGCTGCCAGATTCTATGCATCAGAAGTTCTATTAGCACTCGAATATCTTCACATGTTAGGAATAGTTTACAGAGATTTGAAACCAGAGAACCTGTTAATCCGAGACGAAGGCCACATCATGCTCTCCGATTTCGACCTCTCTCTCCGCTGCTCCGTCAGCCCTACTCTCGTCAAATCCTCCTCCGTCAATGTCAATGGCAGCTCCACCACCGGACACGCCGGCACCAACGGTGGCGGCAGCGGCGGTATCCTCGACGATGAGTTCGCCGTCCATGGATGTATGCAGCCTTCCAACTTCCTCCCTCGCATCCTCCCTTCCAAGAAGAATCGCAAGTCGAAATCCGACTTCGGCCTCTTCGTCGGCGGAGCATTGCCGGAACTCATGGCGGAGCCGACGAATGTTAGATCGATGTCGTTTGTCGGCACGCACGAGTATTTAGCGCCGGAGATCATCCAAGGCGAAGGCCATGGCAGCGCCGTTGACTGGTGGACATTTGGAATCTTCCTCTACGAGCTTCTTCACGGAACAACGCCGTTTAAAGGATCTGGAAATAGAGCTACTCTGTTTAATGTTGTCGGACAGCCGCTTAGATTCCCGGAGACGCCGCAGGTGAGTCTACAGGCGAGGGATCTGATCAGAGGCCTTCTTGTGAAGGAGCCGCAAAAGAGAATCGCGTACAGAAGAGGCGCTACTGAGATTAAACAGCATCCGTTCTTCGATGGAGTGAACTGGGCGTTGGTGAGAAGCGCTATGCCGCCGCACGTGCCGGAGCCGGTCGACTTCTCACAGTTCGCCCGTAAGAAGAGCGGTGGTAGCGGTGTAGGCAGTGGCGGTGGAGCGGTAGAAGTAGCAGCGGCAGGAGCGGCGGCGGCGGCGGCGTCACCTGTGGAGAGTTCTTCGCCTTCTACTGGACGCGATCCCAATTATGTGGATTTTGAATACTTCTAG | 1680 | 51.19 | MWSKSDNKPDGSEIFSNSSKGENDCHGGMNVNAPNFVKNPPDSLRRIDQIAKNGINSGNQTATMNHEFHSGQAGGSIAPIPSGAPATNMKNINNNNNSTFFPTKSGCDGMETLGMVIKPHTGGDVRWDAVNMVSKGGQLNLSHFRLLKRLGYGDIGSVYLVELRGTDTFFAMKVMDKASLASRNKVVRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEEAARFYASEVLLALEYLHMLGIVYRDLKPENLLIRDEGHIMLSDFDLSLRCSVSPTLVKSSSVNVNGSSTTGHAGTNGGGSGGILDDEFAVHGCMQPSNFLPRILPSKKNRKSKSDFGLFVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIQGEGHGSAVDWWTFGIFLYELLHGTTPFKGSGNRATLFNVVGQPLRFPETPQVSLQARDLIRGLLVKEPQKRIAYRRGATEIKQHPFFDGVNWALVRSAMPPHVPEPVDFSQFARKKSGGSGVGSGGGAVEVAAAGAAAAAASPVESSSPSTGRDPNYVDFEYF | 559 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 7501805 | 7503721 | + | CmoCh07G013280.1 | Cmo07g01328 | 386636 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo07g01328 | 559 | CDD | STKc_phototropin_like | 142 | 504 | - | - | |
Cmo07g01328 | 559 | SMART | serkin_6 | 144 | 483 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo07g01328 | 559 | MobiDBLite | consensus disorder prediction | 536 | 559 | - | - | |
Cmo07g01328 | 559 | PANTHER | SERINE/THREONINE-PROTEIN KINASE AGC1-5 | 92 | 559 | - | - | |
Cmo07g01328 | 559 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Cmo07g01328 | 559 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Cmo07g01328 | 559 | PANTHER | FLIPPASE KINASE 1-RELATED | 92 | 559 | - | - | |
Cmo07g01328 | 559 | Gene3D | Phosphorylase Kinase; domain 1 | 142 | 227 | - | - | |
Cmo07g01328 | 559 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 265 | 277 | IPR008271 | GO:0004672|GO:0006468 | |
Cmo07g01328 | 559 | Gene3D | Transferase(Phosphotransferase) domain 1 | 228 | 297 | - | - | |
Cmo07g01328 | 559 | Pfam | Protein kinase domain | 377 | 483 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo07g01328 | 559 | Pfam | Protein kinase domain | 145 | 298 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo07g01328 | 559 | SUPERFAMILY | Protein kinase-like (PK-like) | 141 | 507 | IPR011009 | - | |
Cmo07g01328 | 559 | MobiDBLite | consensus disorder prediction | 70 | 91 | - | - | |
Cmo07g01328 | 559 | ProSiteProfiles | Protein kinase domain profile. | 144 | 483 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo07g01328 | 559 | Gene3D | Transferase(Phosphotransferase) domain 1 | 359 | 501 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo07g01328 | Cmo-Chr7:7501805 | Cmo18g00610 | Cmo-Chr18:7402842 | 0 | dispersed | |
Cmo03g00110 | Cmo-Chr3:1547262 | Cmo07g01328 | Cmo-Chr7:7501805 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74497 | PF00069 | Pkinase | 1.60E-37 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo07g01328 | - | - | cmos:111435499 | 857.44 |