Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo07g01331 ATGGGAGACAACAATAATGCCAACAGAGGCCTTGTTTCGGCCAACGCCGCCGCTAATTCCAACCGGAACAACAACGGCAGCCACCACAAGAAGCCGGAGTGGCTGCAGCAGTACGATCTAATTGGGAAGATCGGAGAGGGTACCTATGGCCTTGTGTTCCTTGCTAAAATCAAACCCCCTTCGCCGAGTCGCGGTAAGTCCATTGCCATCAAGAAGTTCAAGCAATCCAAGGACGGTGATGGCGTCTCCCCAACTGCCATCCGCGAAATTATGTTACTGCGGGAAATAACACACGAGAATGTCGTTAAGCTTGTAAATGTTCATATCAATCATACAGATATGTCGCTGTATCTAGCTTTCGATTATGCTGAACATGATCTTTATGAAATCATTAGACATCATCGGGACAAGGCTAACCATCCCCTTAATCAGTACACCGTTAAATCTTTGCTTTGGCAACTTCTCAATGGATTGAACTATCTCCACAGTAATTGGATCATTCATCGTGATTTAAAGCCATCGAATATTTTGGTAATGGGTGAAGGAGAAGAACAAGGATTGGTTAAAATAGCTGATTTTGGACTTGCAAGAATATACCAAGCTCCCTTGAAGCCATTATCTGAAAATGGAGTTGTCGTCACCATTTGGTATCGTGCACCTGAACTTCTCCTTGGAGCAAAACACTATACTAGTGCTGTTGATATGTGGGCTGTTGGATGTATTTTTGCTGAGCTCTTGACACTGAAGCCATTGTTTCAAGGGCAAGAAGTCAAAGGGAATCCAAATCCTTTCCAGCTTGATCAACTCGACAAGATATTTAAGGTTTTAGGCCATCCCACGGTAGAGAAGTGGCCAACACTTGCTAATCTTCCACATTGGCAACAAGATTTACAGCATATACAGGGACATAAATATGACACTGCTGGATTGTTTAATGTGGTGCACCTTTCTCCAAAAAGTCCTGCGTATGATCTTCTATCCAAAATGCTTGAGTATGATCCTCGAAAGCGTATAACAGCAGCCCAAGCTCTTGAGCATGAGTATTTTCGATTAGAACCACTGCCAGGATACAATGCTCTTGTACCAATTCAACCTGGAGAGAAGGTCATTAATTATCCAACTCGCCCTGTGGACACAACCACGGATTTTGAGGGAACAACTAGCCTTCAGCCCCCACAAACGGCGTCTGGAAATGCGGTAAACATGCAAGGTGCTCATGCTGTGGCAGGCAGATCTGTCCCTCGGCCGATGATAGGAGTTGGCATGCCAAGGATGCCTCCTCAGGGCATGGGTCCTTATAACCTTGCATCTCAGGCTGGGATGGGCATGAATCCTGGTGGCATCCCTATGCAGCGTGGTGTTTCTGCCCAAGCTCATCAGCAACAACAGTTAAGGAGAAAAGATCCAGGAATGGGAATGCCAGGCTATCCTCCACAGCAGAAACAACAAAGACGCTACTGA 1461 45.72 MGDNNNANRGLVSANAAANSNRNNNGSHHKKPEWLQQYDLIGKIGEGTYGLVFLAKIKPPSPSRGKSIAIKKFKQSKDGDGVSPTAIREIMLLREITHENVVKLVNVHINHTDMSLYLAFDYAEHDLYEIIRHHRDKANHPLNQYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEQGLVKIADFGLARIYQAPLKPLSENGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGQEVKGNPNPFQLDQLDKIFKVLGHPTVEKWPTLANLPHWQQDLQHIQGHKYDTAGLFNVVHLSPKSPAYDLLSKMLEYDPRKRITAAQALEHEYFRLEPLPGYNALVPIQPGEKVINYPTRPVDTTTDFEGTTSLQPPQTASGNAVNMQGAHAVAGRSVPRPMIGVGMPRMPPQGMGPYNLASQAGMGMNPGGIPMQRGVSAQAHQQQQLRRKDPGMGMPGYPPQQKQQRRY 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7505805 7514353 + CmoCh07G013310.1 Cmo07g01331 386639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo07g01331 486 SMART serkin_6 38 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo07g01331 486 ProSiteProfiles Protein kinase domain profile. 38 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo07g01331 486 ProSitePatterns Protein kinases ATP-binding region signature. 44 72 IPR017441 GO:0005524
Cmo07g01331 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Cmo07g01331 486 PANTHER CYCLIN-DEPENDENT KINASE E-1 26 480 - -
Cmo07g01331 486 Gene3D Phosphorylase Kinase; domain 1 17 120 - -
Cmo07g01331 486 SUPERFAMILY Protein kinase-like (PK-like) 33 350 IPR011009 -
Cmo07g01331 486 CDD STKc_CDK8_like 37 349 - -
Cmo07g01331 486 Gene3D Transferase(Phosphotransferase) domain 1 121 360 - -
Cmo07g01331 486 Pfam Protein kinase domain 38 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo07g01331 486 PANTHER CELL DIVISION PROTEIN KINASE 26 480 - -
Cmo07g01331 486 MobiDBLite consensus disorder prediction 445 486 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g01331 Cmo-Chr7:7505805 Cmo18g00702 Cmo-Chr18:8870450 7.47E-79 dispersed
Cmo07g01331 Cmo-Chr7:7505805 Cmo05g00082 Cmo-Chr5:327174 1.59E-81 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74498 PF00069 Pkinase 2.50E-68 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo07g01331 K02208 - csv:101203984 899.812