Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo07g01384 | ATGGCGGAGTACGATCTAACTCCGCGAATCGCTCCAAATTTGGACCGTCATCTTGTTTTCCCTCTCCTCGAGTTCCTTCAAGAGAGGCAGTTTTACCATGACGAGCAGATCCTCAAGGCCAAAATCGAGCTTCTCAACAGGACCAATATGGTTGATTACGCCATGGACATTCACAAGTCGCTGTATCACACCGACGATGTTCCTCAAGGCATGGCCATATCTTGGGTGGAAGTGGTGACGAGGCTTAAGGCTTTGGAGGAGTCCGCGGCGCCACTTGTTGCTTTTCTGCAGAATCCGGCTGCTGTTCAGGAACTGAGGGCTGATAAGCAGTACAATCTTCAAATGCTTAATGATCGTTATCAGATTGGTCCAGATCAAATAGAAGCGTTATACCAATATGCCAAATTTCAGTTCGAGTGTGGGAACTACTCTGGTGCTGCTGACTATCTCTATCAGTACAGAGCCTTATGCACAGACAGTGAAAGGAGCTTGAGTGCTCTATGGGGAAAATTGGCAGCTGAAATTTTAATGCAGAATTGGGATATTGCTGTAGAGGAGCTTAATCGTTTGAAAGAGATTATCGACTCTAAGAATTTCTCATCATCTATGAAACAAGTGCAAGGCAGAATATGGTTGATGCATTGGAGCCTCTTCATATTTTTCAATCACGACAATGGAAGAACACAGATAATTGACCTGTTTAATCAAGATAAGTATTTAAATGCCATTCAAACCAATGCTCCCCATCTTTTACGCTATTTGGCCACTGCTTTCATTGTTAACAAAAGGCGGCGGCCACAATTCAAAGATTTTATCAAGGTTATTCAGCAGGAACAATATTCCTATAATGATCCCATCACAGAGTTTTTGACTTGTGTGTATGTCAATTATGATTTCGATGGGGCACAAAAGAAGATGAGGGAGTGCGAAGAAGTTATATTGAACGATCCTTTCCTAGGAAAGAGGATTGAAGAAGGTAACCTTTCCACCGTTCCTTTGAGAGATGAGTTTTTGGAAACTGCTCGTCTGTTCGTCTTTGAGACTTTCTGCAGAATACATCAGCGTATTGATATGAGCGTCCTTGCTGAAAAGTTGAACTTGAATTATGAGGAAGCTGAGCAGTGGATTGTAAATCTCGTGCGCACGTCAAAGCTTGATGCGAAGATTGATTCAAAGACGGGAACAGTTATAATGGAAACGAACAAGCCTGATGTGCATGAGCAATTGATCGACCACACGAAGTCATTATCTGGGCGTACTTACAAGTTAGTGACCCAACTTCTAGAGCATGCACAGGCCCAAGCAGCTAGATAA | 1314 | 43.0 | MAEYDLTPRIAPNLDRHLVFPLLEFLQERQFYHDEQILKAKIELLNRTNMVDYAMDIHKSLYHTDDVPQGMAISWVEVVTRLKALEESAAPLVAFLQNPAAVQELRADKQYNLQMLNDRYQIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRALCTDSERSLSALWGKLAAEILMQNWDIAVEELNRLKEIIDSKNFSSSMKQVQGRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTNAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQYSYNDPITEFLTCVYVNYDFDGAQKKMRECEEVILNDPFLGKRIEEGNLSTVPLRDEFLETARLFVFETFCRIHQRIDMSVLAEKLNLNYEEAEQWIVNLVRTSKLDAKIDSKTGTVIMETNKPDVHEQLIDHTKSLSGRTYKLVTQLLEHAQAQAAR | 437 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 7910102 | 7913599 | + | CmoCh07G013840.1 | Cmo07g01384 | 386692 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo07g01384 | 437 | PIRSF | Transl_init_eIF3e | 1 | 437 | IPR016650 | GO:0003743|GO:0005737|GO:0005852 | |
Cmo07g01384 | 437 | SUPERFAMILY | Winged helix DNA-binding domain | 333 | 403 | IPR036390 | - | |
Cmo07g01384 | 437 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E | 1 | 435 | IPR016650 | GO:0003743|GO:0005737|GO:0005852 | |
Cmo07g01384 | 437 | Pfam | PCI domain | 285 | 399 | IPR000717 | - | |
Cmo07g01384 | 437 | ProSiteProfiles | PCI domain profile. | 219 | 403 | IPR000717 | - | |
Cmo07g01384 | 437 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E | 1 | 435 | - | - | |
Cmo07g01384 | 437 | SUPERFAMILY | TPR-like | 120 | 192 | IPR011990 | GO:0005515 | |
Cmo07g01384 | 437 | SMART | PINT_4 | 332 | 416 | IPR000717 | - | |
Cmo07g01384 | 437 | Gene3D | - | 130 | 433 | - | - | |
Cmo07g01384 | 437 | SMART | eIF3_N_2 | 5 | 137 | IPR019010 | - | |
Cmo07g01384 | 437 | Hamap | Eukaryotic translation initiation factor 3 subunit E [EIF3E]. | 2 | 429 | IPR016650 | GO:0003743|GO:0005737|GO:0005852 | |
Cmo07g01384 | 437 | Pfam | eIF3 subunit 6 N terminal domain | 5 | 137 | IPR019010 | - | |
Cmo07g01384 | 437 | SMART | motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 | 332 | 416 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo03g00041 | Cmo-Chr3:751691 | Cmo07g01384 | Cmo-Chr7:7910102 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo07g01384 | K03250 | - | csv:101205199 | 815.453 |