Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo07g01403 | ATGGGATCTTCTGTTGCTGCAATGGGCATGGTTTCCGACTCCAAATTCCATGTTCTTGCTGTTGATGACAGCGTCATCGATCGGAAATTGATTGAGCGTCTCCTTAAAACCTCCTCTTTTCAAGTAACTACGGTTGATTCTGGGAGTAAGGCTTTGGAGTTTTTGGGGTATGATCCTGGAAATAACTCGATTCCCTATGTTTCTCCTAACCACCACCACCACCACCACCACCACCACCATCATCATCATCATCAGGAAGTGGATGTGAATCTTGTTATTACTGATTACTGTATGCCTGGGATGACTGGCTATGATTTGTTGAAGAAGATCAAGGGGTCCAAGGCTCTGAGAAACATACCTGTTGTGATTATGTCATCTGAGAATGTACCTGCAAGAATCAATAGATGTTTAGAAGAAGGAGCAGAAGAGTTCTTCTTGAAACCGGTCCGACTTTCGGACGTCAACAGGCTTAAACCCCACATGTTGAAAACCAAACTCAAATGTGGCAAACCAGAAAGAACAGAGGAAGATGAGCCTGATTCAGGAAGCCAATCCCAAGCACCAGAGCAACAACATCATGAACAACAAGAACAATTGCAATCGCAGCAGGTGCCAACACCGCTGCAAGATCAAGATCAAGATCAATTGCCATCCGTGCCAGTGTTACCAACGCCGCAACAGGAGCAAGAACAGTTGCAATTGCTCCCGCCAACACCTCCGCAACAATCGAACAACAACAACAACAACAAGAGGAAGGCAATGGAAGATGGACTTTCACCAGATAGAACAAGGCGTAGATACAATGGTATTACAACCATGGTGTAG | 825 | 45.09 | MGSSVAAMGMVSDSKFHVLAVDDSVIDRKLIERLLKTSSFQVTTVDSGSKALEFLGYDPGNNSIPYVSPNHHHHHHHHHHHHHHQEVDVNLVITDYCMPGMTGYDLLKKIKGSKALRNIPVVIMSSENVPARINRCLEEGAEEFFLKPVRLSDVNRLKPHMLKTKLKCGKPERTEEDEPDSGSQSQAPEQQHHEQQEQLQSQQVPTPLQDQDQDQLPSVPVLPTPQQEQEQLQLLPPTPPQQSNNNNNNKRKAMEDGLSPDRTRRRYNGITTMV | 274 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 8052325 | 8054473 | - | CmoCh07G014030.1 | Cmo07g01403 | 386711 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo07g01403 | 274 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 11 | 272 | IPR045279 | GO:0009736 | |
Cmo07g01403 | 274 | SMART | REC_2 | 16 | 161 | IPR001789 | GO:0000160 | |
Cmo07g01403 | 274 | Pfam | Response regulator receiver domain | 83 | 153 | IPR001789 | GO:0000160 | |
Cmo07g01403 | 274 | CDD | REC_typeA_ARR | 18 | 157 | - | - | |
Cmo07g01403 | 274 | MobiDBLite | consensus disorder prediction | 181 | 253 | - | - | |
Cmo07g01403 | 274 | ProSiteProfiles | Response regulatory domain profile. | 17 | 162 | IPR001789 | GO:0000160 | |
Cmo07g01403 | 274 | MobiDBLite | consensus disorder prediction | 165 | 180 | - | - | |
Cmo07g01403 | 274 | SUPERFAMILY | CheY-like | 14 | 157 | IPR011006 | - | |
Cmo07g01403 | 274 | MobiDBLite | consensus disorder prediction | 165 | 274 | - | - | |
Cmo07g01403 | 274 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR ARR9-LIKE | 11 | 272 | - | - | |
Cmo07g01403 | 274 | Gene3D | - | 17 | 263 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo03g00167 | Cmo07g01403 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g00318 | Cmo-Chr4:1580019 | Cmo07g01403 | Cmo-Chr7:8052325 | 1.76E-53 | dispersed | |
Cmo07g01403 | Cmo-Chr7:8052325 | Cmo15g00865 | Cmo-Chr15:4388575 | 3.16E-68 | dispersed | |
Cmo15g00681 | Cmo-Chr15:3335966 | Cmo07g01403 | Cmo-Chr7:8052325 | 5.12E-33 | dispersed | |
Cmo04g01404 | Cmo-Chr4:7166482 | Cmo07g01403 | Cmo-Chr7:8052325 | 9.50E-67 | transposed | |
Cmo14g00521 | Cmo-Chr14:2633524 | Cmo07g01403 | Cmo-Chr7:8052325 | 1.37E-79 | transposed | |
Cmo03g00167 | Cmo-Chr3:2501963 | Cmo07g01403 | Cmo-Chr7:8052325 | 1.06E-52 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
10193 | PF00072 | Response_reg | 4.50E-14 | CL0304 | Cmo | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo07g01403 | K14492 | - | csv:101220999 | 353.214 |