Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo08g00037 ATGGACGACTCCACATTCCTGTATTCAGCTCTCTGCATTGCTCTCGTGGTTGCCATAAGCTATGCTCTGAAACCAAAGTCCCACAAAAATCTCCCTCCAACGCCACCCTCTATCCCAATTATAGGCCATCTCCATCTCCTCAAGCCCCCAGTTCACAGAAGCTTATTAACTCTCTCACAGAAGTATGGCCCAGTGCTTTCCCTTCGTTTCGGCTCTCGTTTAGTCGTCGTCGTCTCATCCATCGACGCAGCCGAAGAATGCTTCACGAAAAATGATGTCGTTTTCGCTAACCGTCCAGACTTTGCTGTGAGTAAGTGCTTGAGTTACAACCACACCACCCTTGGAGCCGCTCCCTATGGCGACCACTGGCGAAAACTTCGCCGAGTGAGCGCTCTCGAAATACTCTCCGCCAATCGTCTCAACACGAATTCCGCCATTCGAAGAGATGAAGTGAGGAGATTGGCAAATAAATTATCTCAAACTTCGAGAGATGATTTTGCAAGAGTGGAGTTTAAATCCATGGTGAAAGAACTGACGCTGAATATAACGATGAGAATGGTGGCCGGGAAGCGATATTATGGGGAAGAAACAGATGAAAGCAGTGAAGCCATGACGTTTCGAGCTATTGTCGATGAGCTGTTCGAGTTCATGTTAGCGCAATATCCAGCTGACTTTTTGCCGATCTTGAAGTACATTGATATCCAGGGCTTCATGAAGAGAGCCAAGAAGCTCATCAAAAGGGTGGATGCATTTTGGCAAGGAATCGTTGATGAACATCGAACCAATCAAATCCATAATCAAGAAATGGAGAATAGTATGGTTGCCCATTTCCTCAAGTTGCAGGAGTCGCAGCCTCAATATTACACCGATGACATCATCAAAGGCCTCATTTTGGTCCGTGCTCCCAAATATTTACTTACCACAATGGTACTCGGTGGCTCAGACACCACTGCGGTGACAATAGAGTGGGCAATGTCAAATCTCCTAAACCATCCAACGGTACTAAAGAAGGCAAGAGCTGAACTAGAGACCCAACTCGGAGATCAATTACTTGAAGAATCCGAGGTTCCAAAGCTAAGCTACCTACGATGTATAGTCCTCGAAACTCTTCGATTGTACCCAGCTGGCCCACTCCTACTGCCACATAAGTCTTCTGCTGACTGTACATTATCAGGATACGACGTGCCACGTGACACGATCTTATTGGTGAACGCGTGGGCCATCCATAGGGATCCCACATTGTGGGAAGATCCAACAAGCTTTAGACCTGAGAGGTTTGAGGGTGGGGATGGCGAGGCCAATAGTAAGTTGATGATTGCATTTGGTTTGGGAAGGAGAGCTTGTCCAGGATCTGGAATGGCACATCGCGTGCTGGGATTGACTTTAGGACTGCTGATTCAATGTTTTGATTGGAAGAGCATTGATGGGAAGGAAGTCGATATGACGGAAGGAAAAGGTGTTAGCATGCCTAAAGCTGAACCACTTGAAGCACTTTGTAAGCCACGACCAATCGCTAGCAAGCTGCTGCTTTGA 1533 47.03 MDDSTFLYSALCIALVVAISYALKPKSHKNLPPTPPSIPIIGHLHLLKPPVHRSLLTLSQKYGPVLSLRFGSRLVVVVSSIDAAEECFTKNDVVFANRPDFAVSKCLSYNHTTLGAAPYGDHWRKLRRVSALEILSANRLNTNSAIRRDEVRRLANKLSQTSRDDFARVEFKSMVKELTLNITMRMVAGKRYYGEETDESSEAMTFRAIVDELFEFMLAQYPADFLPILKYIDIQGFMKRAKKLIKRVDAFWQGIVDEHRTNQIHNQEMENSMVAHFLKLQESQPQYYTDDIIKGLILVRAPKYLLTTMVLGGSDTTAVTIEWAMSNLLNHPTVLKKARAELETQLGDQLLEESEVPKLSYLRCIVLETLRLYPAGPLLLPHKSSADCTLSGYDVPRDTILLVNAWAIHRDPTLWEDPTSFRPERFEGGDGEANSKLMIAFGLGRRACPGSGMAHRVLGLTLGLLIQCFDWKSIDGKEVDMTEGKGVSMPKAEPLEALCKPRPIASKLLL 510
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 189769 191364 + CmoCh08G000370.1 Cmo08g00037 386770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo08g00037 510 Gene3D Cytochrome P450 23 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00037 510 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 12 503 - -
Cmo08g00037 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Cmo08g00037 510 Pfam Cytochrome P450 32 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00037 510 SUPERFAMILY Cytochrome P450 32 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00037 510 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 12 503 - -
Cmo08g00037 510 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00037 510 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00037 510 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00037 510 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00037 510 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00037 510 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00037 510 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00037 510 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00037 510 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00037 510 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00037 510 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00037 510 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00037 510 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g00037 Cmo-Chr8:189769 Cmo20g00988 Cmo-Chr20:5633295 0 dispersed
Cmo17g01340 Cmo-Chr17:10478187 Cmo08g00037 Cmo-Chr8:189769 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo08g00037 K13260 K25487 csv:101208069 791.186