Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cmo08g00064	ATGGCGGTTTTGAAGCTTTTGGCTCTCTGTCTTTCATTCTTCTTGTTGAACAGAGCCCCTGTTCAAGGTGGTGATTCCTTGCATTTCCCTTCTTCTGATGTTCAGCTTCTTCTGGAAAAGATCAGAGCTTCACTTGAAGGTGATACTCAGAACTTGCTTTTGTCTTCATGGAATTACTCTTTGCCACTTTGTCAATGGAGGGGACTCAAATGGGTCTTCTCTAATGGAACATCTCTGGTTTGCAGTGATTCTTCTTCTCCCCAGTGGTCTAATCTCACTCTCTTCAAAGACCCTTCTCTTCATCTTCTCTCCCTGCAACTTCCTTCTGCTAACCTCTCTGGTTCCTTGCCTAAGGAGCTTGGGGAGTTTACTATGCTCCAAAGTCTCTATCTCAACATAAACTCTTTGACTGGACCCATTCCACTTGAACTTGGTTATAGCTCCTCTCTTTCTGACATTGATTTGAGTAGCAATCTGTTGAGTGGAGCTCTTCCACCCTCGATCTGGAATCTGTGTGATAAACTTGTTTCTGTCAGGCTTGATGGGAATTCATTATCTGGGTCTCTGCCTGAGCCGGCTTTACCAGATTCCACCTGCAAGAGTTTGGAGGCTTTGGATTTTGGCAACAACCAGATTTCAGGTACTTTCCCAGAATTCATTACTAGATTTCAGGGCTTGAAAGAGCTTGATCTTGGGAACAATTTGTTGTCTGGACAAATCCCTCAGAGCTTAGGCCAGTTAGAGCTGGAGAAGTTGAACCTTTCAAATAACAACTTCAGTGGAATATTGCCTGTGTTTGGTAATAACTCAAAGTTTGGTGTGGAGGCTTTTGAAGGGAACAGTCCTGGGCTTTGTGGGGAGCCTTTGAAAAGCTGTGCAGGAGCTTCTCATTTGAGTTCAGGCGCCATTGCTGGTCTTGTCATCGGCTTGATGACTGGGACGGTTGTTTTAGCTTCATTGCTTATTGGTTATATGCAAAACAAGAAGAAGAAGATAACTGAGAGTGAAGATGAGATTGAGGAAGGAGAAGATGAAGAAAACGGGGGCGGCGGTATCGGCGGCGGCACAGGTGGTGAAGGAAAGCTCATTTTGTTTCAGGGTGGTGAGCATTTGACATTGGATGATGTCTTGAATGCTACAGGGCAGGTTATGGAGAAAACAAGCTATGGCACGATATATAAAGCAAAGCTTGCTGATGGAGGTACCATTGCTCTGAGACTCCTGAGAGAAGGTAGTTGCAAAGACAGAAACACTTGCTCGTCTGTGATTAAACAATTGGGAAAGATTCGCCATGAGAATTTGATTCCTTTGAGAGCGTTCTATCAGGGAAAGAGAGGAGAAAAGCTGCTCATATATGACTATCTGCCGATCAGAACTTTACATGATTTTCTTCATGAATCTAGAGCAGGAAAACCAGTGTTGAACTGGGCTAGGAGGCACAAGATTGCGTTAGGCGTCGCCCGGGGACTAGCTCATCTTCACACTGGTCTTGAAGTCCCCATTACACATGGTAATGTGAGATCAAAAAATGTACTTGTGGACGACTTCTTTACAGTGAGACTGACAGAGTTCGGGCTCGACAAGCTAATGATTCCATCGGTAGCTGACGAGATTGTATCGCTTGCAAAGTCGGACGGGTACAAGGCACCAGAGCTGCAAAGGATGAAGAAATGCAATTCAAGAACAGATGTGTATGCATTTGGGATCTTGCTGTTAGAGATTCTGATTGGGAAGAAGCCAGGGAAGAGTGGAAGAAGTGGAGAGTTTGTGGATCTGCCATCAATGGTAAAAGTGGCAGTTCTGGAGGAGACAACAATGGAGGTGTTTGATGTGGAGGTTTTGAAAGGGATTAGAAGTCCCATGGAAGATGGAGTGGTTCAGGCATTGAAGCTCGCAATGGGCTGCTGTGCACCAGTGGCTTCTGTGAGACCCTCCATGGATGAAGTTGTGAAGCAGCTGGAAGAAAACAGACCAAGAAACAGATCTGCTCTGTACAGCCCAACAGAAACAAGAAGCGAAATCGGTACCCCTTTTTGA	2037	45.16	MAVLKLLALCLSFFLLNRAPVQGGDSLHFPSSDVQLLLEKIRASLEGDTQNLLLSSWNYSLPLCQWRGLKWVFSNGTSLVCSDSSSPQWSNLTLFKDPSLHLLSLQLPSANLSGSLPKELGEFTMLQSLYLNINSLTGPIPLELGYSSSLSDIDLSSNLLSGALPPSIWNLCDKLVSVRLDGNSLSGSLPEPALPDSTCKSLEALDFGNNQISGTFPEFITRFQGLKELDLGNNLLSGQIPQSLGQLELEKLNLSNNNFSGILPVFGNNSKFGVEAFEGNSPGLCGEPLKSCAGASHLSSGAIAGLVIGLMTGTVVLASLLIGYMQNKKKKITESEDEIEEGEDEENGGGGIGGGTGGEGKLILFQGGEHLTLDDVLNATGQVMEKTSYGTIYKAKLADGGTIALRLLREGSCKDRNTCSSVIKQLGKIRHENLIPLRAFYQGKRGEKLLIYDYLPIRTLHDFLHESRAGKPVLNWARRHKIALGVARGLAHLHTGLEVPITHGNVRSKNVLVDDFFTVRLTEFGLDKLMIPSVADEIVSLAKSDGYKAPELQRMKKCNSRTDVYAFGILLLEILIGKKPGKSGRSGEFVDLPSMVKVAVLEETTMEVFDVEVLKGIRSPMEDGVVQALKLAMGCCAPVASVRPSMDEVVKQLEENRPRNRSALYSPTETRSEIGTPF	678

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
8	369338	371787	+	CmoCh08G000640.1	Cmo08g00064	386797

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cmo08g00064	678	MobiDBLite	consensus disorder prediction	334	353	-	-
	Cmo08g00064	678	MobiDBLite	consensus disorder prediction	658	678	-	-
	Cmo08g00064	678	Gene3D	Ribonuclease Inhibitor	32	196	IPR032675	-
	Cmo08g00064	678	Gene3D	Ribonuclease Inhibitor	198	296	IPR032675	-
	Cmo08g00064	678	ProSiteProfiles	Protein kinase domain profile.	378	678	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Cmo08g00064	678	Pfam	Protein tyrosine and serine/threonine kinase	382	653	IPR001245	GO:0004672\|GO:0006468
	Cmo08g00064	678	Gene3D	Phosphorylase Kinase; domain 1	364	454	-	-
	Cmo08g00064	678	PANTHER	KINASE-LIKE PROTEIN TMKL1-RELATED	6	678	-	-
	Cmo08g00064	678	Pfam	Leucine rich repeat	201	259	IPR001611	GO:0005515
	Cmo08g00064	678	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED	6	678	-	-
	Cmo08g00064	678	Coils	Coil	325	345	-	-
	Cmo08g00064	678	MobiDBLite	consensus disorder prediction	659	678	-	-
	Cmo08g00064	678	Gene3D	Transferase(Phosphotransferase) domain 1	456	671	-	-
	Cmo08g00064	678	SUPERFAMILY	L domain-like	50	266	-	-
	Cmo08g00064	678	SUPERFAMILY	Protein kinase-like (PK-like)	383	654	IPR011009	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	Cmo08g00064	Cmo17g01218	CST

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	Cmo08g00064	Cmo-Chr8:369338	Cmo17g01218	Cmo-Chr17:9719525	0	dispersed
	Cmo08g00064	Cmo-Chr8:369338	Cmo04g01155	Cmo-Chr4:5892448	2.32E-103	transposed

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	74508	PF07714	PK_Tyr_Ser-Thr	1.30E-25	CL0016	Cmo	PK

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cmo08g00064	-		-	cmo:103497530	1150.19